RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 FBXO4Q9UKT5 387 aa14.2□□□□□ -0.14
TMEM54-206ENST00000482771 FAM205CA6NFA0 338 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 LRRIQ4A6NIV6 560 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 KIF4AO95239 1232 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 THP07101 528 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 OR1D2P34982 312 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 PFKPQ01813 784 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 UVSSAQ2YD98 709 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 ZBTB41Q5SVQ8 909 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 CCDC43Q96MW1 224 aaKnown RBP14.19□□□□□ -0.14
TMEM54-206ENST00000482771 OSBPL6Q9BZF3 934 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 CXCL16Q9H2A7 254 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 PDRG1Q9NUG6 133 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 DNMT3BQ9UBC3 853 aaKnown RBP14.19□□□□□ -0.14
TMEM54-206ENST00000482771 F5P12259 2224 aa14.19□□□□□ -0.14
TMEM54-206ENST00000482771 TDRD15B5MCY1 1934 aaKnown RBP14.18□□□□□ -0.14
TMEM54-206ENST00000482771 TTLL13PA6NNM8 815 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 PTGESO14684 152 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 CDKL5O76039 1030 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 XRCC6P12956 609 aaKnown RBP eCLIP14.18□□□□□ -0.14
TMEM54-206ENST00000482771 IGFBP6P24592 240 aaPredicted RBP14.18□□□□□ -0.14
TMEM54-206ENST00000482771 HOXA9P31269 272 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 RARRES1P49788 294 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 SCRN1Q12765 414 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 ELAVL2Q12926 359 aaKnown RBP14.18□□□□□ -0.14
TMEM54-206ENST00000482771 RAB33AQ14088 237 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 TMEM132AQ24JP5 1023 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 RSPO2Q6UXX9 243 aaPredicted RBP14.18□□□□□ -0.14
TMEM54-206ENST00000482771 SLC7A14Q8TBB6 771 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 MCRS1Q96EZ8 462 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 NELL2Q99435 816 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 FZD8Q9H461 694 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 TTC12Q9H892 705 aaPredicted RBP14.18□□□□□ -0.14
TMEM54-206ENST00000482771 LTB4R2Q9NPC1 389 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 GPRC5CQ9NQ84 441 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 USP20Q9Y2K6 914 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 PCDHGA2Q9Y5H1 932 aa14.18□□□□□ -0.14
TMEM54-206ENST00000482771 SPTLC1O15269 473 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 USO1O60763 962 aaKnown RBP14.17□□□□□ -0.14
TMEM54-206ENST00000482771 TXKP42681 527 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 ATXN1P54253 815 aaKnown RBP14.17□□□□□ -0.14
TMEM54-206ENST00000482771 NR5A1Q13285 461 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 CALCRLQ16602 461 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 PABPC1LQ4VXU2 614 aaKnown RBP14.17□□□□□ -0.14
TMEM54-206ENST00000482771 PDXDC1Q6P996 788 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 TSSK4Q6SA08 328 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 NOSTRINQ8IVI9 506 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 NPAS3Q8IXF0 933 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 GPR161Q8N6U8 529 aaKnown RBP14.17□□□□□ -0.14
TMEM54-206ENST00000482771 ING5Q8WYH8 240 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 CNTNAP3BQ96NU0 1288 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 CNTNAP3Q9BZ76 1288 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 PLA2G2FQ9BZM2 168 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 TM6SF1Q9BZW5 370 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 PRMT7Q9NVM4 692 aaPredicted RBP14.17□□□□□ -0.14
TMEM54-206ENST00000482771 ZSCAN32Q9NX65 697 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 KCNH3Q9ULD8 1083 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 MRPS23Q9Y3D9 190 aaKnown RBP14.17□□□□□ -0.14
TMEM54-206ENST00000482771 FANCMQ8IYD8 2048 aa14.17□□□□□ -0.14
TMEM54-206ENST00000482771 NCAM2O15394 837 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 RECQL4O94761 1208 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 LIG1P18858 919 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 ATP2B1P20020 1258 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 SDHBP21912 280 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 TARSP26639 723 aaKnown RBP14.16□□□□□ -0.14
TMEM54-206ENST00000482771 MAGEA9P43362 315 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 NAB2Q15742 525 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 PPP4R3CPQ6ZMV5 832 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 TPRG1Q6ZUI0 275 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 ZBTB44Q8NCP5 570 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 SECISBP2LQ93073 1101 aaKnown RBP14.16□□□□□ -0.14
TMEM54-206ENST00000482771 CLDN23Q96B33 292 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 PRIMPOLQ96LW4 560 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 PDZD7Q9H5P4 517 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 GDAQ9Y2T3 454 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 ZMYM2Q9UBW7 1377 aa14.16□□□□□ -0.14
TMEM54-206ENST00000482771 N4BP3O15049 544 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 ECI2O75521 394 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 B3GAT3O94766 335 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 POU2F2P09086 479 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 FGFR3P22607 806 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 KRT2P35908 639 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 FZD5Q13467 585 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 PRPF4BQ13523 1007 aaKnown RBP14.15□□□□□ -0.14
TMEM54-206ENST00000482771 FAM187BQ17R55 369 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 TANGO2Q6ICL3 276 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 POTEHQ6S545 545 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.15□□□□□ -0.14
TMEM54-206ENST00000482771 ZNF852Q6ZMS4 543 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 ZBTB8OSQ8IWT0 167 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 HEBP1Q9NRV9 189 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 ORC3Q9UBD5 711 aaPredicted RBP14.15□□□□□ -0.14
TMEM54-206ENST00000482771 TPCN1Q9ULQ1 816 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 CDY1Q9Y6F8 540 aa14.15□□□□□ -0.14
TMEM54-206ENST00000482771 COL4A3Q01955 1670 aa14.14□□□□□ -0.15
TMEM54-206ENST00000482771 ACKR2O00590 384 aa14.14□□□□□ -0.15
TMEM54-206ENST00000482771 PFKFB2O60825 505 aa14.14□□□□□ -0.15
TMEM54-206ENST00000482771 LILRB5O75023 590 aa14.14□□□□□ -0.15
TMEM54-206ENST00000482771 KRT37O76014 449 aa14.14□□□□□ -0.15
TMEM54-206ENST00000482771 CTDNEP1O95476 244 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms