RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 SNX27Q96L92 541 aa17.19■□□□□ 0.34
COL16A1-212ENST00000482478 GPR62Q9BZJ7 368 aa17.19■□□□□ 0.34
COL16A1-212ENST00000482478 CXCL16Q9H2A7 254 aa17.19■□□□□ 0.34
COL16A1-212ENST00000482478 POMKQ9H5K3 350 aa17.19■□□□□ 0.34
COL16A1-212ENST00000482478 PARVGQ9HBI0 331 aa17.19■□□□□ 0.34
COL16A1-212ENST00000482478 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.19■□□□□ 0.34
COL16A1-212ENST00000482478 CCDC39Q9UFE4 941 aa17.19■□□□□ 0.34
COL16A1-212ENST00000482478 HCN4Q9Y3Q4 1203 aa17.19■□□□□ 0.34
COL16A1-212ENST00000482478 NR2E1Q9Y466 385 aa17.19■□□□□ 0.34
COL16A1-212ENST00000482478 C5orf42Q9H799 3197 aa17.18■□□□□ 0.34
COL16A1-212ENST00000482478 HNRNPDLO14979 420 aaKnown RBP17.18■□□□□ 0.34
COL16A1-212ENST00000482478 MYBP10242 640 aa17.18■□□□□ 0.34
COL16A1-212ENST00000482478 MAPTP10636 758 aaKnown RBP17.18■□□□□ 0.34
COL16A1-212ENST00000482478 PTPAQ15257 358 aa17.18■□□□□ 0.34
COL16A1-212ENST00000482478 CEP57Q86XR8 500 aa17.18■□□□□ 0.34
COL16A1-212ENST00000482478 MYCT1Q8N699 235 aa17.18■□□□□ 0.34
COL16A1-212ENST00000482478 TDRD5Q8NAT2 981 aaKnown RBP17.18■□□□□ 0.34
COL16A1-212ENST00000482478 LRRC15Q8TF66 581 aa17.18■□□□□ 0.34
COL16A1-212ENST00000482478 SLC22A17Q8WUG5 538 aa17.18■□□□□ 0.34
COL16A1-212ENST00000482478 GOLGA2P5Q9HBQ8 144 aa17.18■□□□□ 0.34
COL16A1-212ENST00000482478 C11orf16Q9NQ32 467 aa17.18■□□□□ 0.34
COL16A1-212ENST00000482478 BLOC1S4Q9NUP1 217 aa17.18■□□□□ 0.34
COL16A1-212ENST00000482478 DAXXQ9UER7 740 aaPredicted RBP17.18■□□□□ 0.34
COL16A1-212ENST00000482478 FBXO2Q9UK22 296 aaPredicted RBP17.18■□□□□ 0.34
COL16A1-212ENST00000482478 MYH15Q9Y2K3 1946 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 TOM1L1O75674 476 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 RPL17P18621 184 aaKnown RBP17.17■□□□□ 0.34
COL16A1-212ENST00000482478 LIG4P49917 911 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 PLXNA3P51805 1871 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 NCKAP1LP55160 1127 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 ELAVL2Q12926 359 aaKnown RBP17.17■□□□□ 0.34
COL16A1-212ENST00000482478 STK38Q15208 465 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 RTP2Q5QGT7 225 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 FAM171A1Q5VUB5 890 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 CCDC149Q6ZUS6 474 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 SNX21Q969T3 373 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 EPSTI1Q96J88 318 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 CLIC6Q96NY7 704 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 PPP1R10Q96QC0 940 aaKnown RBP17.17■□□□□ 0.34
COL16A1-212ENST00000482478 USP28Q96RU2 1077 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 LRFN3Q9BTN0 628 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 ZSCAN16Q9H4T2 348 aaPredicted RBP17.17■□□□□ 0.34
COL16A1-212ENST00000482478 SLC38A7Q9NVC3 462 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 DPP7Q9UHL4 492 aa17.17■□□□□ 0.34
COL16A1-212ENST00000482478 B3GAT3O94766 335 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 PROZP22891 400 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 NAB2Q15742 525 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 PSMD5Q16401 504 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 ARSHQ5FYA8 562 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 HERC4Q5GLZ8 1057 aaPredicted RBP17.16■□□□□ 0.34
COL16A1-212ENST00000482478 ATAT1Q5SQI0 421 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 FOXD4L5Q5VV16 416 aaPredicted RBP17.16■□□□□ 0.34
COL16A1-212ENST00000482478 KIAA0319Q5VV43 1072 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 KANK3Q6NY19 840 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 PRSS55Q6UWB4 352 aaPredicted RBP17.16■□□□□ 0.34
COL16A1-212ENST00000482478 KRI1Q8N9T8 703 aaKnown RBP17.16■□□□□ 0.34
COL16A1-212ENST00000482478 FOXD4L4Q8WXT5 416 aaPredicted RBP17.16■□□□□ 0.34
COL16A1-212ENST00000482478 UROC1Q96N76 676 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 ACAP3Q96P50 834 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 TTPALQ9BTX7 342 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 CCSER1Q9C0I3 900 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 PTPRHQ9HD43 1115 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 STK17AQ9UEE5 414 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 RAPGEFL1Q9UHV5 662 aa17.16■□□□□ 0.34
COL16A1-212ENST00000482478 PRR33A8MZF0 331 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 C2CD4DB7Z1M9 353 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 ABLIM1O14639 778 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 CLDN3O15551 220 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 GPR37L1O60883 481 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 LILRB3O75022 631 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 EFEMP2O95967 443 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 STAT6P42226 847 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 CLCNKBP51801 687 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 SEZ6Q53EL9 994 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 ZPBP2Q6X784 338 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-212ENST00000482478 USP49Q70CQ1 688 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 HAUS6Q7Z4H7 955 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 PALB2Q86YC2 1186 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 ZBTB45Q96K62 511 aaPredicted RBP17.15■□□□□ 0.34
COL16A1-212ENST00000482478 RXFP1Q9HBX9 757 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 CHST7Q9NS84 486 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 SRPRBQ9Y5M8 271 aaKnown RBP17.15■□□□□ 0.34
COL16A1-212ENST00000482478 DENND4AQ7Z401 1863 aa17.15■□□□□ 0.34
COL16A1-212ENST00000482478 SMIM28A0A1B0GU29 152 aa17.14■□□□□ 0.33
COL16A1-212ENST00000482478 PODXLO00592 558 aa17.14■□□□□ 0.33
COL16A1-212ENST00000482478 TGM5O43548 720 aa17.14■□□□□ 0.33
COL16A1-212ENST00000482478 TRAK2O60296 914 aa17.14■□□□□ 0.33
COL16A1-212ENST00000482478 BRD1O95696 1058 aa17.14■□□□□ 0.33
COL16A1-212ENST00000482478 CXCL8P10145 99 aa17.14■□□□□ 0.33
COL16A1-212ENST00000482478 ZNF131P52739 623 aa17.14■□□□□ 0.33
COL16A1-212ENST00000482478 PPP2R3AQ06190 1150 aa17.14■□□□□ 0.33
COL16A1-212ENST00000482478 LIN9Q5TKA1 542 aa17.14■□□□□ 0.33
COL16A1-212ENST00000482478 RRAGBQ5VZM2 374 aa17.14■□□□□ 0.33
COL16A1-212ENST00000482478 NTPCRQ9BSD7 190 aaKnown RBP17.14■□□□□ 0.33
COL16A1-212ENST00000482478 CNTN3Q9P232 1028 aa17.14■□□□□ 0.33
COL16A1-212ENST00000482478 TMEM189-UBE2V1I3L0A0 370 aa17.13■□□□□ 0.33
COL16A1-212ENST00000482478 SPATA31D3P0C874 917 aa17.13■□□□□ 0.33
COL16A1-212ENST00000482478 SCP2P22307 547 aa17.13■□□□□ 0.33
COL16A1-212ENST00000482478 SOX4Q06945 474 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms