RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 APBB1IPQ7Z5R6 666 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-212ENST00000482251 GPR149Q86SP6 731 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 GPBP1Q86WP2 473 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 SYT2Q8N9I0 419 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-212ENST00000482251 KREMEN2Q8NCW0 462 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 FAM122AQ96E09 287 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 CALML4Q96GE6 196 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 ZBTB45Q96K62 511 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-212ENST00000482251 REEP2Q9BRK0 252 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 TCHPQ9BT92 498 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 CCDC94Q9BW85 323 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-212ENST00000482251 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 TMEM134Q9H6X4 195 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 CHST7Q9NS84 486 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 SSX2IPQ9Y2D8 614 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 CLIC4Q9Y696 253 aa11.49□□□□□ -0.57
CPSF4-212ENST00000482251 K7ENM7 598 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 ABLIM1O14639 778 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 TGM5O43548 720 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 MARCKSP29966 332 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-212ENST00000482251 GRM5P41594 1212 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 MATR3P43243 847 aaKnown RBP eCLIP11.48□□□□□ -0.57
CPSF4-212ENST00000482251 SOX4Q06945 474 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-212ENST00000482251 RESTQ13127 1097 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 MCM6Q14566 821 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 PSMD5Q16401 504 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 MPZL3Q6UWV2 235 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 TMEM130Q8N3G9 435 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 C3orf58Q8NDZ4 430 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 TMEM161BQ8NDZ6 487 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 BICD1Q96G01 975 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 SNX27Q96L92 541 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 AK8Q96MA6 479 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 PPP1R10Q96QC0 940 aaKnown RBP11.48□□□□□ -0.57
CPSF4-212ENST00000482251 TTPALQ9BTX7 342 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 TIPINQ9BVW5 301 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 ZHX3Q9H4I2 956 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 RXFP1Q9HBX9 757 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 PTPRHQ9HD43 1115 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 LIMD1Q9UGP4 676 aa11.48□□□□□ -0.57
CPSF4-212ENST00000482251 ARIH1Q9Y4X5 557 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-212ENST00000482251 CCDC195A0A1B0GUA6 201 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 MEFVO15553 781 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-212ENST00000482251 ADAM12O43184 909 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 B3GAT3O94766 335 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 FAM13AO94988 1023 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 BRD1O95696 1058 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 BMP15O95972 392 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 PDGFBP01127 241 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-212ENST00000482251 KRT18P05783 430 aaKnown RBP11.47□□□□□ -0.57
CPSF4-212ENST00000482251 MAPTP10636 758 aaKnown RBP11.47□□□□□ -0.57
CPSF4-212ENST00000482251 SYT1P21579 422 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 BRCC3P46736 316 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 SIGLEC14Q08ET2 396 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 MTMR3Q13615 1198 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 NOLC1Q14978 699 aaKnown RBP eCLIP11.47□□□□□ -0.57
CPSF4-212ENST00000482251 ARSHQ5FYA8 562 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 SMG7Q92540 1137 aaKnown RBP11.47□□□□□ -0.57
CPSF4-212ENST00000482251 PBXIP1Q96AQ6 731 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 C18orf25Q96B23 403 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-212ENST00000482251 ZMAT2Q96NC0 199 aaKnown RBP11.47□□□□□ -0.57
CPSF4-212ENST00000482251 C17orf75Q9HAS0 396 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.47□□□□□ -0.57
CPSF4-212ENST00000482251 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-212ENST00000482251 BLOC1S4Q9NUP1 217 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 RBM19Q9Y4C8 960 aaKnown RBP11.47□□□□□ -0.57
CPSF4-212ENST00000482251 CITO14578 2027 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 WDFY4Q6ZS81 3184 aa11.47□□□□□ -0.57
CPSF4-212ENST00000482251 CLUHO75153 1309 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 SMIM28A0A1B0GU29 152 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-212ENST00000482251 N4BP1O75113 896 aaKnown RBP11.46□□□□□ -0.57
CPSF4-212ENST00000482251 CXCL8P10145 99 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 MCF2P10911 925 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 PDCP20941 246 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 PROZP22891 400 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 TKTP29401 623 aaKnown RBP11.46□□□□□ -0.57
CPSF4-212ENST00000482251 GBP2P32456 591 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-212ENST00000482251 LONP1P36776 959 aaKnown RBP11.46□□□□□ -0.57
CPSF4-212ENST00000482251 SMTNP53814 917 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 CREMQ03060 361 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 SPAG1Q07617 926 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 ELMSAN1Q6PJG2 1045 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 C15orf39Q6ZRI6 1047 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 USP49Q70CQ1 688 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 GET4Q7L5D6 327 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-212ENST00000482251 SUGP1Q8IWZ8 645 aaKnown RBP11.46□□□□□ -0.57
CPSF4-212ENST00000482251 ST13P5Q8NFI4 369 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-212ENST00000482251 LNX1Q8TBB1 728 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-212ENST00000482251 SPIRE2Q8WWL2 714 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 PIK3R5Q8WYR1 880 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 RAD54LQ92698 747 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 ZNF707Q96C28 371 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-212ENST00000482251 ASIC4Q96FT7 647 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 EPSTI1Q96J88 318 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 CLIC6Q96NY7 704 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 ACAP3Q96P50 834 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 CLSTN3Q9BQT9 956 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 HAPLN2Q9GZV7 340 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 PIDD1Q9HB75 910 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms