RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 GCNT1Q02742 428 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 CYP24A1Q07973 514 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 QPCTQ16769 361 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 SGO2Q562F6 1265 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 TRMT1LQ7Z2T5 733 aaKnown RBP16.44■□□□□ 0.22
C9orf3-218ENST00000482056 NLRX1Q86UT6 975 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 GPD1LQ8N335 351 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 TTLL6Q8N841 843 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 ANKS4BQ8N8V4 417 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 TAS1R2Q8TE23 839 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 GRK7Q8WTQ7 553 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 BTBD6Q96KE9 485 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 FBXL18Q96ME1 805 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 PDCD2LQ9BRP1 358 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 MOV10L1Q9BXT6 1211 aaKnown RBP16.44■□□□□ 0.22
C9orf3-218ENST00000482056 VPS33BQ9H267 617 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 C1orf112Q9NSG2 853 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 PCDHA10Q9Y5I2 948 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 SMIM23A6NLE4 172 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 RASGRF2O14827 1237 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 FSCN2O14926 492 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 GARTP22102 1010 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 CCND2P30279 289 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 SLC1A1P43005 524 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 BPIFB4P59827 614 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 PPARDQ03181 441 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 TBC1D10BQ4KMP7 808 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-218ENST00000482056 TAX1BP1Q86VP1 789 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 ZNF677Q86XU0 584 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 CCDC13Q8IYE1 715 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 ZDHHC14Q8IZN3 488 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 MDM1Q8TC05 714 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 ATP6V0A1Q93050 837 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 CCDC114Q96M63 670 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 SENP7Q9BQF6 1050 aa16.44■□□□□ 0.22
C9orf3-218ENST00000482056 NTPCRQ9BSD7 190 aaKnown RBP16.44■□□□□ 0.22
C9orf3-218ENST00000482056 NSRP1Q9H0G5 558 aaKnown RBP16.44■□□□□ 0.22
C9orf3-218ENST00000482056 AVENQ9NQS1 362 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-218ENST00000482056 PHF20L1A8MW92 1017 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 CCNE2O96020 404 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 FGFR4P22455 802 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 ATP5DP30049 168 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 SIX1Q15475 284 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-218ENST00000482056 NSMFQ6X4W1 530 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 CCDC197Q8NCU1 140 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 MCPH1Q8NEM0 835 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 DDX1Q92499 740 aaKnown RBP16.43■□□□□ 0.22
C9orf3-218ENST00000482056 BICD1Q96G01 975 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 CEP170P1Q96L14 293 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 POP1Q99575 1024 aaKnown RBP16.43■□□□□ 0.22
C9orf3-218ENST00000482056 LRRC4CQ9HCJ2 640 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 ACP6Q9NPH0 428 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 INTS9Q9NV88 658 aaKnown RBP16.43■□□□□ 0.22
C9orf3-218ENST00000482056 KCNG1Q9UIX4 513 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 ANAPC7Q9UJX3 599 aa16.43■□□□□ 0.22
C9orf3-218ENST00000482056 ZNFX1Q9P2E3 1918 aaKnown RBP16.42■□□□□ 0.22
C9orf3-218ENST00000482056 TCRBV7S2A1N4TA0A589 114 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 HNRNPDLO14979 420 aaKnown RBP16.42■□□□□ 0.22
C9orf3-218ENST00000482056 MAFGO15525 162 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 CLDN3O15551 220 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 ATP9AO75110 1047 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 DLATP10515 647 aaKnown RBP16.42■□□□□ 0.22
C9orf3-218ENST00000482056 ITIH2P19823 946 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 CAV1Q03135 178 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 BRDTQ58F21 947 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-218ENST00000482056 SV2AQ7L0J3 742 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 CCDC25Q86WR0 208 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 NIM1KQ8IY84 436 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 PSPC1Q8WXF1 523 aaKnown RBP16.42■□□□□ 0.22
C9orf3-218ENST00000482056 GPRASP2Q96D09 838 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 IFT74Q96LB3 600 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 KIFC3Q9BVG8 833 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 KIAA1586Q9HCI6 787 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 ZNF277Q9NRM2 450 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-218ENST00000482056 PGAP2Q9UHJ9 254 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 ZNRF3Q9ULT6 936 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 ASAP2O43150 1006 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 GAS8O95995 478 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 MNAT1P51948 309 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 KRT17Q04695 432 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 LACTB2Q53H82 288 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-218ENST00000482056 WDR44Q5JSH3 913 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 MFSD5Q6N075 450 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 ANO5Q75V66 913 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 SNF8Q96H20 258 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 KDM4CQ9H3R0 1056 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 TOPORSQ9NS56 1045 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-218ENST00000482056 HOMER3Q9NSC5 361 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 ASIC3Q9UHC3 531 aa16.42■□□□□ 0.22
C9orf3-218ENST00000482056 DGAT1O75907 488 aa16.41■□□□□ 0.22
C9orf3-218ENST00000482056 POTEJP0CG39 1038 aa16.41■□□□□ 0.22
C9orf3-218ENST00000482056 GHRP10912 638 aa16.41■□□□□ 0.22
C9orf3-218ENST00000482056 SCP2P22307 547 aa16.41■□□□□ 0.22
C9orf3-218ENST00000482056 KCNJ1P48048 391 aa16.41■□□□□ 0.22
C9orf3-218ENST00000482056 RTP1P59025 263 aa16.41■□□□□ 0.22
C9orf3-218ENST00000482056 ANKRD20A8PQ5CZ79 823 aa16.41■□□□□ 0.22
C9orf3-218ENST00000482056 EPS8L3Q8TE67 593 aaKnown RBP16.41■□□□□ 0.22
C9orf3-218ENST00000482056 DHX38Q92620 1227 aaKnown RBP16.41■□□□□ 0.22
C9orf3-218ENST00000482056 CCDC134Q9H6E4 229 aa16.41■□□□□ 0.22
C9orf3-218ENST00000482056 SAMD15Q9P1V8 674 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms