RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 RPUSD2Q8IZ73 545 aaKnown RBP15.56■□□□□ 0.08
CHD3-211ENST00000481999 FAM76AQ8TAV0 307 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 AFG1LQ8WV93 481 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 PSPC1Q8WXF1 523 aaKnown RBP15.56■□□□□ 0.08
CHD3-211ENST00000481999 FAM212AQ96EL1 285 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 CPA4Q9UI42 421 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 PNMA3Q9UL41 463 aa15.56■□□□□ 0.08
CHD3-211ENST00000481999 ADCY3O60266 1144 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 SNAI1O95863 264 aaPredicted RBP15.55■□□□□ 0.08
CHD3-211ENST00000481999 MMEP08473 750 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 NNTQ13423 1086 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 TTLL4Q14679 1199 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 C2CD6Q53TS8 623 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 PRAMEF19Q5SWL8 479 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 CHADLQ6NUI6 762 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 GPR142Q7Z601 462 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 EPS8L1Q8TE68 723 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 ATP8B4Q8TF62 1192 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 BBXQ8WY36 941 aaPredicted RBP15.55■□□□□ 0.08
CHD3-211ENST00000481999 TSPYL1Q9H0U9 437 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 RBAKQ9NYW8 714 aaPredicted RBP15.55■□□□□ 0.08
CHD3-211ENST00000481999 COG5Q9UP83 839 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 UMODL1Q5DID0 1318 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 GOLGA6CA6NDK9 693 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 EXTL3O43909 919 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 OPA1O60313 960 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 MSCO60682 206 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 H2AFZP0C0S5 128 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 GOLGA6DP0CG33 693 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 GARTP22102 1010 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 ANXA13P27216 316 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 GTF2A2P52657 109 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 SPRYD7Q5W111 196 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 ALS2CLQ60I27 953 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 H2AFVQ71UI9 128 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 TCHPQ9BT92 498 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 GOLGA6AQ9NYA3 693 aa15.55■□□□□ 0.08
CHD3-211ENST00000481999 GOLGA8KD6RF30 607 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 MAPK13O15264 365 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 LGR5O75473 907 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 TOMM70O94826 608 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 CHRNB2P17787 502 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 TNFAIP3P21580 790 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 SNRPFP62306 86 aaKnown RBP15.54■□□□□ 0.08
CHD3-211ENST00000481999 BIRC3Q13489 604 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 KIF22Q14807 665 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 VPS36Q86VN1 386 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 LRRC57Q8N9N7 239 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 TPCN2Q8NHX9 752 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 SCFD2Q8WU76 684 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 FNBP1Q96RU3 617 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 AGPAT1Q99943 283 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 MAF1Q9H063 256 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 LAMA2P24043 3122 aaKnown RBP15.54■□□□□ 0.08
CHD3-211ENST00000481999 A0A0B4J269 797 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 VNN1O95497 513 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 RFC5P40937 340 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 IFI16Q16666 785 aaKnown RBP15.54■□□□□ 0.08
CHD3-211ENST00000481999 EFCAB12Q6NXP0 572 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 LRRC31Q6UY01 552 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 DPP9Q86TI2 863 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 CPNE8Q86YQ8 564 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 SLC35G2Q8TBE7 412 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.54■□□□□ 0.08
CHD3-211ENST00000481999 SUCLA2Q9P2R7 463 aaPredicted RBP15.54■□□□□ 0.08
CHD3-211ENST00000481999 IVNS1ABPQ9Y6Y0 642 aa15.54■□□□□ 0.08
CHD3-211ENST00000481999 INO80B-WBP1J3KQ70 363 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 CES2O00748 559 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 KRT5P13647 590 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 INSRRP14616 1297 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 GPC3P51654 580 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 PPFIA1Q13136 1202 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 PHLDB2Q86SQ0 1253 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 TMEM192Q8IY95 271 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 FAM71AQ8IYT1 594 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 NPLOC4Q8TAT6 608 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 MORC4Q8TE76 937 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 TAF4BQ92750 862 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 SH3GL2Q99962 352 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 INO80BQ9C086 356 aaPredicted RBP15.53■□□□□ 0.08
CHD3-211ENST00000481999 GDF3Q9NR23 364 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 NOCTQ9UK39 431 aaKnown RBP15.53■□□□□ 0.08
CHD3-211ENST00000481999 COQ4Q9Y3A0 265 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 ADGRA2Q96PE1 1338 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 P4HA2O15460 535 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 HSF2BPO75031 334 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 LGALS2P05162 132 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 CFHP08603 1231 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 PAK2Q13177 524 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 LLGL2Q6P1M3 1020 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.53■□□□□ 0.08
CHD3-211ENST00000481999 DAAM2Q86T65 1068 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 TMC2Q8TDI7 906 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 SHC3Q92529 594 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 RUFY1Q96T51 708 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 MPHOSPH6Q99547 160 aaKnown RBP15.53■□□□□ 0.08
CHD3-211ENST00000481999 KATNBL1Q9H079 304 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 APOBEC3GQ9HC16 384 aaKnown RBP15.53■□□□□ 0.08
CHD3-211ENST00000481999 STYXL1Q9Y6J8 313 aa15.53■□□□□ 0.08
CHD3-211ENST00000481999 KCNK3O14649 394 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms