RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 STPG1Q5TH74 334 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 CPLX2Q6PUV4 134 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 SRGAP1Q7Z6B7 1085 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 RNF168Q8IYW5 571 aaPredicted RBP10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 HDAC7Q8WUI4 952 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 HAS1Q92839 578 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 FAM20AQ96MK3 541 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 FAM193BQ96PV7 902 aaPredicted RBP10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 LXNQ9BS40 222 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 TMEM175Q9BSA9 504 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 ADAM33Q9BZ11 813 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 PLA2G2FQ9BZM2 168 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 SLKQ9H2G2 1235 aaPredicted RBP10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 ARRDC1-AS1Q9H2J1 176 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 SMOC1Q9H4F8 434 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 RGL1Q9NZL6 768 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 POLIQ9UNA4 740 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 SSX2IPQ9Y2D8 614 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 MRPS17Q9Y2R5 130 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 PPME1Q9Y570 386 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 CNTNAP2Q9UHC6 1331 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 AKAP13Q12802 2813 aa10.5□□□□□ -0.73
SMARCE1-210ENST00000481231 CCDC194A0A1B0GVG4 234 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 AXIN1O15169 862 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 CCL16O15467 120 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 FOXD2O60548 495 aaPredicted RBP10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 DKC1O60832 514 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 EFEMP2O95967 443 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 P4HBP07237 508 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 GCFC2P16383 781 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 YWHABP31946 246 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 RFC5P40937 340 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 NOVA1P51513 510 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 CCR3P51677 355 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 PPP4R3AQ6IN85 833 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 LILRA6Q6PI73 481 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 CEP68Q76N32 757 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 NEK8Q86SG6 692 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 FERMT3Q86UX7 667 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 NPAS3Q8IXF0 933 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 RNF149Q8NC42 400 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 SMG8Q8ND04 991 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 OXER1Q8TDS5 423 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 GATA6Q92908 595 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 LSM14BQ9BX40 385 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 TM6SF1Q9BZW5 370 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 RNF39Q9H2S5 420 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 GJB4Q9NTQ9 266 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 KANSL3Q9P2N6 904 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 WASF3Q9UPY6 502 aa10.49□□□□□ -0.73
SMARCE1-210ENST00000481231 TMEM8BA6NDV4 472 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 ARL5CA6NH57 179 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 ZBTB39O15060 712 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 CCNT1O60563 726 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 TSPAN1O60635 241 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 DTNBO60941 627 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 RBM25P49756 843 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 CYP4A11Q02928 519 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 SPIRE1Q08AE8 756 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 ZNF252P-AS1Q0IIN9 211 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 GAS6Q14393 721 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 GRM2Q14416 872 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 EPHA7Q15375 998 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 XKR9Q5GH70 373 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 PIK3AP1Q6ZUJ8 805 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 C4orf19Q8IY42 314 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 EXOC8Q8IYI6 725 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 COLGALT2Q8IYK4 626 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 DYDC2Q96IM9 177 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 GAD1Q99259 594 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 EIF2AQ9BY44 585 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 ZSWIM4Q9H7M6 989 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 LMAN1LQ9HAT1 526 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 XPNPEP1Q9NQW7 623 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 CHST7Q9NS84 486 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 HCFC1R1Q9NWW0 138 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 HES2Q9Y543 173 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 IPPQ9Y573 584 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 DMXL2Q8TDJ6 3036 aa10.48□□□□□ -0.73
SMARCE1-210ENST00000481231 FAM205CA6NFA0 338 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 TBX3O15119 743 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 ASAP2O43150 1006 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 EPB41L2O43491 1005 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 MARCH6O60337 910 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 CDKL5O76039 1030 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 ERLIN2O94905 339 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 C8AP07357 584 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 ITGA4P13612 1032 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 MLH1P40692 756 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 CXCL12P48061 93 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 PTENP60484 403 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 DSC1Q08554 894 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 SCRN1Q12765 414 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 CTTNQ14247 550 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 SOWAHCQ53LP3 525 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 EARS2Q5JPH6 523 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 NCAPH2Q6IBW4 605 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 TCEAL6Q6IPX3 200 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 NOTUMQ6P988 496 aa10.47□□□□□ -0.73
SMARCE1-210ENST00000481231 POTEHQ6S545 545 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms