RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 TMEM62Q0P6H9 643 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 FSCN1Q16658 493 aaKnown RBP20.54■□□□□ 0.88
CCM2-214ENST00000481194 GLYCTKQ8IVS8 523 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 ELMOD1Q8N336 334 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 STAG3L1P0CL83 205 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 THPOP40225 353 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 PSMC1P62191 440 aaKnown RBP20.54■□□□□ 0.88
CCM2-214ENST00000481194 CDK17Q00537 523 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 CYP24A1Q07973 514 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 TFDP2Q14188 446 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 MAP4K3Q8IVH8 894 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 TC2NQ8N9U0 490 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 UBN1Q9NPG3 1134 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 SYNJ2BP-COX16A0A087WUM0 186 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 LRRD1A4D1F6 860 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 BTBD19C9JJ37 291 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 MAPK13O15264 365 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 SRGAP2BP0DMP2 458 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 COX16Q9P0S2 106 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 GYPCP04921 128 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 SDC4P31431 198 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 ATICP31939 592 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 ICAM3P32942 547 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 NAA35Q5VZE5 725 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 TRAPPC11Q7Z392 1133 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 NT5DC4Q86YG4 428 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 PORCNQ9H237 461 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 XPNPEP3Q9NQH7 507 aa20.54■□□□□ 0.88
CCM2-214ENST00000481194 COL1A2P08123 1366 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 SP3Q02447 781 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 DCDC2CA8MYV0 355 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 ADCY3O60266 1144 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 ADCYAP1R1P41586 468 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 PTPROQ16827 1216 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 EVI5O60447 810 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 ZNF18P17022 549 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 ITGB5P18084 799 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 ALDH3A1P30838 453 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 VAV3Q9UKW4 847 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 TFRCP02786 760 aaKnown RBP20.53■□□□□ 0.88
CCM2-214ENST00000481194 TAF6P49848 677 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 CCZ1BP86790 482 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 CCZ1P86791 482 aaPredicted RBP20.53■□□□□ 0.88
CCM2-214ENST00000481194 NAB2Q15742 525 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 PASD1Q8IV76 773 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 HSD17B14Q9BPX1 270 aa20.53■□□□□ 0.88
CCM2-214ENST00000481194 SLC9A1P19634 815 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 PCSK1P29120 753 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 NT5C1AQ9BXI3 368 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 STARD7Q9NQZ5 370 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 FXR1P51114 621 aaKnown RBP eCLIP20.52■□□□□ 0.88
CCM2-214ENST00000481194 IL17AQ16552 155 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 DNAJC7Q99615 494 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 SNX9Q9Y5X1 595 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 NRCAMQ92823 1304 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 ACTN1P12814 892 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 PDE11AQ9HCR9 933 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 KIAA1257Q9ULG3 409 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 LRP5O75197 1615 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 CCDC60Q8IWA6 550 aaPredicted RBP20.52■□□□□ 0.88
CCM2-214ENST00000481194 HMX1Q9NP08 348 aaPredicted RBP20.52■□□□□ 0.88
CCM2-214ENST00000481194 DPP3Q9NY33 737 aa20.52■□□□□ 0.88
CCM2-214ENST00000481194 FAM170AA1A519 330 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 ACKR2O00590 384 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 ACADSBP45954 432 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 CCDC63Q8NA47 563 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 IL31RAQ8NI17 732 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 SMIM23A6NLE4 172 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 TBC1D8O95759 1140 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 CLEC4DQ8WXI8 215 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 SGK1O00141 431 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 TRIM59Q8IWR1 403 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 PALM2Q8IXS6 379 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 HPDLQ96IR7 371 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 EHD2Q9NZN4 543 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 PON1P27169 355 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 CUL2Q13617 745 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 ERCC6LQ2NKX8 1250 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 SLC51AQ86UW1 340 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 RHOT1Q8IXI2 618 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 L3MBTL3Q96JM7 780 aaPredicted RBP20.51■□□□□ 0.87
CCM2-214ENST00000481194 CBWD1Q9BRT8 395 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 CALN1Q9BXU9 219 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 MAFO75444 373 aaPredicted RBP20.51■□□□□ 0.87
CCM2-214ENST00000481194 DGKZQ13574 1117 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 TRIM65Q6PJ69 517 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 AGPAT5Q9NUQ2 364 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 PCDHB7Q9Y5E2 793 aa20.51■□□□□ 0.87
CCM2-214ENST00000481194 CBWD2Q8IUF1 395 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 DCP1BQ8IZD4 617 aaKnown RBP20.5■□□□□ 0.87
CCM2-214ENST00000481194 ZBBXA8MT70 800 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 ATP8B1O43520 1251 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 ZRANB2O95218 330 aaKnown RBP eCLIP20.5■□□□□ 0.87
CCM2-214ENST00000481194 VTNP04004 478 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 KCNA3P22001 575 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 EPHB4P54760 987 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 NCAPHQ15003 741 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 VPS37BQ9H9H4 285 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 COG7P83436 770 aa20.5■□□□□ 0.87
CCM2-214ENST00000481194 PAIP2Q9BPZ3 127 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms