RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 HKR1P10072 659 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 HSD3B2P26439 372 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 SOX5P35711 763 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 FAPQ12884 760 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 PRR16Q569H4 304 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 ATXN7L2Q5T6C5 722 aaPredicted RBP4.27□□□□□ -1.73
FN1-221ENST00000480737 OTUD7BQ6GQQ9 843 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 HDGFL2Q7Z4V5 671 aaPredicted RBP4.27□□□□□ -1.73
FN1-221ENST00000480737 REPS2Q8NFH8 660 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 CASKIN2Q8WXE0 1202 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 FATE1Q969F0 183 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 GREM2Q9H772 168 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 IFT122Q9HBG6 1241 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 TMEM74BQ9NUR3 256 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 KLHL11Q9NVR0 708 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 COX11Q9Y6N1 276 aa4.27□□□□□ -1.73
FN1-221ENST00000480737 MAST3O60307 1309 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 SHROOM4Q9ULL8 1493 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 GCSHP23434 173 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 ECHS1P30084 290 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 MTNR1BP49286 362 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 CHN2P52757 468 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 MGAT2Q10469 447 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 FOXI1Q12951 378 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 STRN3Q13033 797 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 TP53BP2Q13625 1128 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 CCDC142Q17RM4 750 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 COLEC12Q5KU26 742 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 B3GNTL1Q67FW5 361 aaPredicted RBP4.26□□□□□ -1.73
FN1-221ENST00000480737 CMIPQ8IY22 773 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 FAM98AQ8NCA5 519 aaKnown RBP4.26□□□□□ -1.73
FN1-221ENST00000480737 SUPT20HQ8NEM7 779 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 OR56A1Q8NGH5 318 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 ASB10Q8WXI3 467 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 SLC9A6Q92581 669 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 RBM12Q9NTZ6 932 aaKnown RBP4.26□□□□□ -1.73
FN1-221ENST00000480737 POGKQ9P215 609 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 EDARQ9UNE0 448 aa4.26□□□□□ -1.73
FN1-221ENST00000480737 USP15Q9Y4E8 981 aaPredicted RBP4.26□□□□□ -1.73
FN1-221ENST00000480737 AKR1B10O60218 316 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 CDKL5O76039 1030 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 ESRRBO95718 433 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 NUDT3O95989 172 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 IL2RBP14784 551 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 CANXP27824 592 aaKnown RBP4.25□□□□□ -1.73
FN1-221ENST00000480737 MCAMP43121 646 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 GPR3P46089 330 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 CDK17Q00537 523 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 OCA2Q04671 838 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 MALLQ13021 153 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 MUM1L1Q5H9M0 696 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 RRP12Q5JTH9 1297 aaKnown RBP4.25□□□□□ -1.73
FN1-221ENST00000480737 SEM1Q6ZVN7 128 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 KRT26Q7Z3Y9 468 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 ADGRG3Q86Y34 549 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 FUBP3Q96I24 572 aaKnown RBP eCLIP4.25□□□□□ -1.73
FN1-221ENST00000480737 BOD1Q96IK1 185 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 RIOX1Q9H6W3 641 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 VTA1Q9NP79 307 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 LANCL2Q9NS86 450 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 ZNHIT2Q9UHR6 403 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 ATP11BQ9Y2G3 1177 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 SIK3Q9Y2K2 1263 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 TNFRSF18Q9Y5U5 241 aa4.25□□□□□ -1.73
FN1-221ENST00000480737 UNC119BA6NIH7 251 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 PTPN7P35236 360 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 MPLP40238 635 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 SLC6A9P48067 706 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 MASP1P48740 699 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 ERVK-21P61565 698 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 RESTQ13127 1097 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 STAT4Q14765 748 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 AFMIDQ63HM1 303 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 SYCE2Q6PIF2 218 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 FAM180AQ6UWF9 173 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 MAPKAPK5Q8IW41 473 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 TMEM132CQ8N3T6 1108 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 LCORLQ8N3X6 602 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 CHAC2Q8WUX2 184 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 ACE2Q9BYF1 805 aaPredicted RBP4.24□□□□□ -1.73
FN1-221ENST00000480737 QRSL1Q9H0R6 528 aaKnown RBP4.24□□□□□ -1.73
FN1-221ENST00000480737 R3HDMLQ9H3Y0 253 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 ZNF277Q9NRM2 450 aaPredicted RBP4.24□□□□□ -1.73
FN1-221ENST00000480737 MOCS1Q9NZB8 636 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 SLC23A1Q9UHI7 598 aa4.24□□□□□ -1.73
FN1-221ENST00000480737 KIAA0355O15063 1070 aa4.23□□□□□ -1.73
FN1-221ENST00000480737 GPR39O43194 453 aa4.23□□□□□ -1.73
FN1-221ENST00000480737 TEX33O43247 280 aa4.23□□□□□ -1.73
FN1-221ENST00000480737 ENDOD1O94919 500 aa4.23□□□□□ -1.73
FN1-221ENST00000480737 FOSP01100 380 aaPredicted RBP4.23□□□□□ -1.73
FN1-221ENST00000480737 ADSLP30566 484 aaPredicted RBP4.23□□□□□ -1.73
FN1-221ENST00000480737 ALDH1A3P47895 512 aa4.23□□□□□ -1.73
FN1-221ENST00000480737 SLC5A3P53794 718 aa4.23□□□□□ -1.73
FN1-221ENST00000480737 SEPT2Q15019 361 aa4.23□□□□□ -1.73
FN1-221ENST00000480737 GPR149Q86SP6 731 aa4.23□□□□□ -1.73
FN1-221ENST00000480737 CMTR2Q8IYT2 770 aaKnown RBP4.23□□□□□ -1.73
FN1-221ENST00000480737 SIMC1Q8NDZ2 872 aa4.23□□□□□ -1.73
FN1-221ENST00000480737 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.23□□□□□ -1.73
FN1-221ENST00000480737 MRI1Q9BV20 369 aa4.23□□□□□ -1.73
FN1-221ENST00000480737 CCM2LQ9NUG4 571 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms