RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 THOP1P52888 689 aa9.44□□□□□ -0.9
TTC3-216ENST00000479930 AP1S1P61966 158 aa9.44□□□□□ -0.9
TTC3-216ENST00000479930 FAM124AQ86V42 546 aa9.44□□□□□ -0.9
TTC3-216ENST00000479930 MRPS31Q92665 395 aaKnown RBP9.44□□□□□ -0.9
TTC3-216ENST00000479930 ACCSQ96QU6 501 aa9.44□□□□□ -0.9
TTC3-216ENST00000479930 SLC9A7Q96T83 725 aa9.44□□□□□ -0.9
TTC3-216ENST00000479930 ZBTB40Q9NUA8 1239 aa9.44□□□□□ -0.9
TTC3-216ENST00000479930 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
TTC3-216ENST00000479930 MYH8P13535 1937 aa9.44□□□□□ -0.9
TTC3-216ENST00000479930 A0A096LPK6 155 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 MAFKO60675 156 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 CHRNA3P32297 505 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 RGS2P41220 211 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 THRSPQ92748 146 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 ACSF2Q96CM8 615 aaPredicted RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 BSDC1Q9NW68 430 aaPredicted RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 DNMT3LQ9UJW3 386 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 KATNA1O75449 491 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 SCRN3Q0VDG4 424 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 DDX39BQ13838 428 aaKnown RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 ST13P4Q8IZP2 240 aaPredicted RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 CCDC134Q9H6E4 229 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 ACAD9Q9H845 621 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 DIABLOQ9NR28 239 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 SH3BGRL2Q9UJC5 107 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 SCINQ9Y6U3 715 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 PLEKHG2Q9H7P9 1386 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 OR7A10O76100 309 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 AMHP03971 560 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 CSF1RP07333 972 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 GPC3P51654 580 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 SP3Q02447 781 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 ZRANB3Q5FWF4 1079 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 BZW1Q7L1Q6 419 aaKnown RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 ARRDC4Q8NCT1 418 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 TNIP2Q8NFZ5 429 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 LZTS2Q9BRK4 669 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 TNNQ9UQP3 1299 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 ERICH3Q5RHP9 1530 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 VARSP26640 1264 aaKnown RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 SOX11P35716 441 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 CTCFP49711 727 aaPredicted RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 CASP9P55211 416 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 REXO1Q8N1G1 1221 aaKnown RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 USP33Q8TEY7 942 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 RBM41Q96IZ5 413 aaKnown RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 RUNDC3BQ96NL0 473 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 VPS35Q96QK1 796 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 RHOBTB2Q9BYZ6 727 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 ZFATQ9P243 1243 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 GOLGA8IPA6NC78 632 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 GOLGA8JA6NMD2 632 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 TRIM38O00635 465 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 PLGP00747 810 aaPredicted RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 C4orf46Q504U0 113 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 LRRC24Q50LG9 513 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 PODNQ7Z5L7 613 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 KRT84Q9NSB2 600 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 LARSQ9P2J5 1176 aaKnown RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 SNX14Q9Y5W7 946 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 AVPR1AP37288 418 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 OCA2Q04671 838 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 TGM3Q08188 693 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 BIKQ13323 160 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 C6orf118Q5T5N4 469 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 ADGRA2Q96PE1 1338 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 USP17L3A6NCW0 530 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 USP17L4A6NCW7 530 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 MYMKA6NI61 221 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 CFAP99D6REC4 459 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 IQSEC1Q6DN90 963 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 ARMCX6Q7L4S7 300 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 USP17L1Q7RTZ2 530 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 ANKFN1Q8N957 763 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 COLEC11Q9BWP8 271 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 DDX28Q9NUL7 540 aaKnown RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 CD274Q9NZQ7 290 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 ABCC4O15439 1325 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 SMARCA4P51532 1647 aa9.43□□□□□ -0.9
TTC3-216ENST00000479930 BAZ2BQ9UIF8 2168 aaKnown RBP9.43□□□□□ -0.9
TTC3-216ENST00000479930 HYKKA2RU49 373 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 IFRD1O00458 451 aaPredicted RBP9.42□□□□□ -0.9
TTC3-216ENST00000479930 FAM107AO95990 144 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 PDHA2P29803 388 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 EPHB4P54760 987 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 CCNG2Q16589 344 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 FBXO31Q5XUX0 539 aaPredicted RBP9.42□□□□□ -0.9
TTC3-216ENST00000479930 RPTNQ6XPR3 784 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 STX12Q86Y82 276 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 CCNYL1Q8N7R7 359 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 USP6NLQ92738 828 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 CNGB3Q9NQW8 809 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 TRPM5Q9NZQ8 1165 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 SNX13Q9Y5W8 968 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 YWHABP31946 246 aaKnown RBP9.42□□□□□ -0.9
TTC3-216ENST00000479930 SURF1Q15526 300 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 TDRD10Q5VZ19 366 aaKnown RBP9.42□□□□□ -0.9
TTC3-216ENST00000479930 NAA35Q5VZE5 725 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 GLB1LQ6UWU2 654 aa9.42□□□□□ -0.9
TTC3-216ENST00000479930 RBM23Q86U06 439 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms