RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 TIFAQ96CG3 184 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 NOL10Q9BSC4 688 aaKnown RBP6.68□□□□□ -1.34
UPF3A-205ENST00000479712 PITHD1Q9GZP4 211 aaPredicted RBP6.68□□□□□ -1.34
UPF3A-205ENST00000479712 SLC12A5Q9H2X9 1139 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 FTSJ1Q9UET6 329 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 SAP30BPQ9UHR5 308 aaKnown RBP6.68□□□□□ -1.34
UPF3A-205ENST00000479712 SERPINB13Q9UIV8 391 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 PCDHB6Q9Y5E3 794 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 CDY2AQ9Y6F7 541 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 PKD1L2Q7Z442 2459 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 USP47Q96K76 1375 aa6.68□□□□□ -1.34
UPF3A-205ENST00000479712 YTHDC2Q9H6S0 1430 aaKnown RBP6.67□□□□□ -1.34
UPF3A-205ENST00000479712 SCN4AP35499 1836 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 GLRBP48167 497 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 RHBDL3P58872 404 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 IL13RA1P78552 427 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 HDAC1Q13547 482 aaPredicted RBP6.67□□□□□ -1.34
UPF3A-205ENST00000479712 UBE4AQ14139 1066 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 ZNF267Q14586 743 aaPredicted RBP6.67□□□□□ -1.34
UPF3A-205ENST00000479712 TARBP2Q15633 366 aaKnown RBP6.67□□□□□ -1.34
UPF3A-205ENST00000479712 ANO4Q32M45 955 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 B3GNT9Q6UX72 402 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 SYNE4Q8N205 404 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 SMARCC2Q8TAQ2 1214 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 SLC35G2Q8TBE7 412 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 GAB3Q8WWW8 586 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 RUNDC1Q96C34 613 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 PRAM1Q96QH2 718 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 TAAR9Q96RI9 348 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 TACO1Q9BSH4 297 aaKnown RBP6.67□□□□□ -1.34
UPF3A-205ENST00000479712 GTPBP4Q9BZE4 634 aaKnown RBP6.67□□□□□ -1.34
UPF3A-205ENST00000479712 SIRT5Q9NXA8 310 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 KCMF1Q9P0J7 381 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 ZFP69BQ9UJL9 534 aa6.67□□□□□ -1.34
UPF3A-205ENST00000479712 OAS3Q9Y6K5 1087 aaKnown RBP6.67□□□□□ -1.34
UPF3A-205ENST00000479712 TRPM7Q96QT4 1865 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 A0A0A6YYJ9 748 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 POU2F2P09086 479 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 GPR15P49685 360 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 NCKAP1LP55160 1127 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 GRM3Q14832 879 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 PHF19Q5T6S3 580 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 KANK2Q63ZY3 851 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 MCTP1Q6DN14 999 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 LILRA6Q6PI73 481 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 DPP8Q6V1X1 898 aaPredicted RBP6.66□□□□□ -1.34
UPF3A-205ENST00000479712 OR5AN1Q8NGI8 311 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 COA7Q96BR5 231 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 HIST1H2AHQ96KK5 128 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 PSMD1Q99460 953 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 HIST1H2AJQ99878 128 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 C1orf112Q9NSG2 853 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 DDX20Q9UHI6 824 aaKnown RBP6.66□□□□□ -1.34
UPF3A-205ENST00000479712 HDAC9Q9UKV0 1011 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 FRMPD2Q68DX3 1309 aaPredicted RBP6.66□□□□□ -1.34
UPF3A-205ENST00000479712 ADGRF5Q8IZF2 1346 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 IRS2Q9Y4H2 1338 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 ANKRD36BQ8N2N9 1353 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 CCDC7Q96M83 1385 aa6.66□□□□□ -1.34
UPF3A-205ENST00000479712 DICER1Q9UPY3 1922 aaKnown RBP6.66□□□□□ -1.34
UPF3A-205ENST00000479712 TTC28Q96AY4 2481 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 CTNND1O60716 968 aaKnown RBP6.65□□□□□ -1.34
UPF3A-205ENST00000479712 DTNBO60941 627 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 IL18BPO95998 194 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 ATF2P15336 505 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 PFKLP17858 780 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 XPAP23025 273 aaPredicted RBP6.65□□□□□ -1.34
UPF3A-205ENST00000479712 EPHX2P34913 555 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 ITGA1P56199 1179 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 PURAQ00577 322 aaKnown RBP6.65□□□□□ -1.34
UPF3A-205ENST00000479712 CD83Q01151 205 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 STILQ15468 1287 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 CCDC178Q5BJE1 867 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 ATAT1Q5SQI0 421 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 GAREM2Q75VX8 874 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 BMP8AQ7Z5Y6 402 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 STPG3Q8N7X2 389 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 PMM1Q92871 262 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 FATE1Q969F0 183 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 HPS3Q969F9 1004 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 ZSWIM3Q96MP5 696 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 CLIC6Q96NY7 704 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 MAP3K14Q99558 947 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 SYT3Q9BQG1 590 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 PCDH18Q9HCL0 1135 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 RNF186Q9NXI6 227 aa6.65□□□□□ -1.34
UPF3A-205ENST00000479712 EVLQ9UI08 416 aaPredicted RBP6.65□□□□□ -1.34
UPF3A-205ENST00000479712 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.64□□□□□ -1.35
UPF3A-205ENST00000479712 NRP2O60462 931 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 CUTAO60888 179 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 MAFO75444 373 aaPredicted RBP6.64□□□□□ -1.35
UPF3A-205ENST00000479712 TRIM27P14373 513 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 IL2RBP14784 551 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 PDCP20941 246 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 CDR1P51861 262 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 MALLQ13021 153 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 ADAM9Q13443 819 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 ADRM1Q16186 407 aa6.64□□□□□ -1.35
UPF3A-205ENST00000479712 PKN2Q16513 984 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms