RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 PROZP22891 400 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 BCAR1P56945 870 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 KRT17Q04695 432 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 ENPEPQ07075 957 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 MYBPC2Q14324 1141 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 MAPK6Q16659 721 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 KYAT1Q16773 422 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 PTPN21Q16825 1174 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 KLHL40Q2TBA0 621 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 ZNF720Q7Z2F6 126 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 TRMT1LQ7Z2T5 733 aaKnown RBP9.77□□□□□ -0.85
DDX56-211ENST00000479602 RHPN2Q8IUC4 686 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 C12orf56Q8IXR9 622 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 FBXL6Q8N531 539 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 RNF149Q8NC42 400 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 BCL7CQ8WUZ0 217 aaPredicted RBP9.77□□□□□ -0.85
DDX56-211ENST00000479602 BSNDQ8WZ55 320 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 TMEM143Q96AN5 459 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 PBXIP1Q96AQ6 731 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 ZNF668Q96K58 619 aaPredicted RBP9.77□□□□□ -0.85
DDX56-211ENST00000479602 RPGRIP1Q96KN7 1286 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 TSPAN18Q96SJ8 248 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 PHOX2BQ99453 314 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 FDXACB1Q9BRP7 624 aaPredicted RBP9.77□□□□□ -0.85
DDX56-211ENST00000479602 ZBP1Q9H171 429 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 PTPRHQ9HD43 1115 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 DACT1Q9NYF0 836 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 SERTAD1Q9UHV2 236 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 HCFC2Q9Y5Z7 792 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 ZNF292O60281 2723 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 GADD45BO75293 160 aaPredicted RBP9.76□□□□□ -0.85
DDX56-211ENST00000479602 PRPF40AO75400 957 aaKnown RBP9.76□□□□□ -0.85
DDX56-211ENST00000479602 FAM13AO94988 1023 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 SMC2O95347 1197 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 AFF1P51825 1210 aaKnown RBP9.76□□□□□ -0.85
DDX56-211ENST00000479602 NUBP1P53384 320 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 ITIH3Q06033 890 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 SKOR2Q2VWA4 1001 aaPredicted RBP9.76□□□□□ -0.85
DDX56-211ENST00000479602 FAM26FQ5R3K3 315 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 UBXN11Q5T124 520 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 SPOUT1Q5T280 376 aaKnown RBP9.76□□□□□ -0.85
DDX56-211ENST00000479602 PLPP4Q5VZY2 271 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 TMC7Q7Z402 723 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 APBB1IPQ7Z5R6 666 aaPredicted RBP9.76□□□□□ -0.85
DDX56-211ENST00000479602 DDX53Q86TM3 631 aaKnown RBP9.76□□□□□ -0.85
DDX56-211ENST00000479602 FEZF2Q8TBJ5 459 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 ZNF507Q8TCN5 953 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 HELQQ8TDG4 1101 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 CASP10Q92851 521 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 CCDC47Q96A33 483 aaKnown RBP9.76□□□□□ -0.85
DDX56-211ENST00000479602 IGSF21Q96ID5 467 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 SH2D3AQ9BRG2 576 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 CLSTN2Q9H4D0 955 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 NRDE2Q9H7Z3 1164 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 TMEM206Q9H813 350 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 GPRC5CQ9NQ84 441 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 TBC1D13Q9NVG8 400 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 CDH22Q9UJ99 828 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 TNFSF13BQ9Y275 285 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 PCDHB13Q9Y5F0 798 aa9.76□□□□□ -0.85
DDX56-211ENST00000479602 NT5C1B-RDH14C9J2C7 533 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 ABLIM1O14639 778 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 TSPAN1O60635 241 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 TOM1L1O75674 476 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 CXCL14O95715 111 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 KRT18P05783 430 aaKnown RBP9.75□□□□□ -0.85
DDX56-211ENST00000479602 CTSAP10619 480 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 AVPR2P30518 371 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 ALDH7A1P49419 539 aaKnown RBP9.75□□□□□ -0.85
DDX56-211ENST00000479602 ASIC1P78348 528 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 NCBP1Q09161 790 aaKnown RBP9.75□□□□□ -0.85
DDX56-211ENST00000479602 CUL4BQ13620 913 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 SMC1AQ14683 1233 aaKnown RBP9.75□□□□□ -0.85
DDX56-211ENST00000479602 ZRSR1Q15695 479 aaKnown RBP9.75□□□□□ -0.85
DDX56-211ENST00000479602 DCAF4L1Q3SXM0 396 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 L1TD1Q5T7N2 865 aaKnown RBP9.75□□□□□ -0.85
DDX56-211ENST00000479602 SMYD5Q6GMV2 418 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 NOTUMQ6P988 496 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 AGMOQ6ZNB7 445 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 TAS1R3Q7RTX0 852 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 HAUS6Q7Z4H7 955 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 ZNF280BQ86YH2 543 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 SLC9A9Q8IVB4 645 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 KSR1Q8IVT5 923 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 RNF168Q8IYW5 571 aaPredicted RBP9.75□□□□□ -0.85
DDX56-211ENST00000479602 ZDHHC14Q8IZN3 488 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 GUF1Q8N442 669 aaKnown RBP9.75□□□□□ -0.85
DDX56-211ENST00000479602 DEPTORQ8TB45 409 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 GOLGA5Q8TBA6 731 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 NLRP7Q8WX94 980 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 RIPOR3Q96MK2 946 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 NECTIN4Q96NY8 510 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 PRRX2Q99811 253 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 MRPL9Q9BYD2 267 aaKnown RBP9.75□□□□□ -0.85
DDX56-211ENST00000479602 MRPL4Q9BYD3 311 aaKnown RBP9.75□□□□□ -0.85
DDX56-211ENST00000479602 MINDY3Q9H8M7 445 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 KMT5AQ9NQR1 393 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 FAM105AQ9NUU6 356 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 PANK4Q9NVE7 773 aa9.75□□□□□ -0.85
DDX56-211ENST00000479602 EXOC7Q9UPT5 735 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms