RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 FGFR3P22607 806 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 RFX1P22670 979 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 PRPF4BQ13523 1007 aaKnown RBP14.68□□□□□ -0.06
ABCF1-206ENST00000479542 PSMD5Q16401 504 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 ME3Q16798 604 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 DCAF4L1Q3SXM0 396 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 PPM1LQ5SGD2 360 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 GET4Q7L5D6 327 aaPredicted RBP14.68□□□□□ -0.06
ABCF1-206ENST00000479542 APBB1IPQ7Z5R6 666 aaPredicted RBP14.68□□□□□ -0.06
ABCF1-206ENST00000479542 NSUN7Q8NE18 718 aaKnown RBP14.68□□□□□ -0.06
ABCF1-206ENST00000479542 FGF13Q92913 245 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 B3GALT6Q96L58 329 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 NELL2Q99435 816 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 PAAF1Q9BRP4 392 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 KLK14Q9P0G3 267 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 MTRRQ9UBK8 725 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 FBXO4Q9UKT5 387 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 CA14Q9ULX7 337 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 BACE2Q9Y5Z0 518 aa14.68□□□□□ -0.06
ABCF1-206ENST00000479542 CACNA1AO00555 2505 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 KANSL1LA0AUZ9 987 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 TRAPPC3O43617 180 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 RECQL4O94761 1208 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 KIF4AO95239 1232 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 C8AP07357 584 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 SP9P0CG40 484 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 GPC5P78333 572 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 TRIM29Q14134 588 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 XKR4Q5GH76 650 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 PRSS55Q6UWB4 352 aaPredicted RBP14.67□□□□□ -0.06
ABCF1-206ENST00000479542 GRASPQ7Z6J2 395 aaPredicted RBP14.67□□□□□ -0.06
ABCF1-206ENST00000479542 CDR2LQ86X02 465 aaPredicted RBP14.67□□□□□ -0.06
ABCF1-206ENST00000479542 ERMNQ8TAM6 284 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 FGF14Q92915 247 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 GPRC5CQ9NQ84 441 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 SNTG2Q9NY99 539 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 GDE1Q9NZC3 331 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
ABCF1-206ENST00000479542 PHLPP2Q6ZVD8 1323 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 POTEMA6NI47 508 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 WNT7AO00755 349 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 MED24O75448 989 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 MICAL2O94851 1124 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 PRKCBP05771 671 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 RPL17P18621 184 aaKnown RBP14.66□□□□□ -0.06
ABCF1-206ENST00000479542 SLC44A4Q53GD3 710 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 AXDND1Q5T1B0 1012 aaPredicted RBP14.66□□□□□ -0.06
ABCF1-206ENST00000479542 PADI6Q6TGC4 694 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 PARM1Q6UWI2 310 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 MAMSTRQ6ZN01 415 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 ANKS3Q6ZW76 656 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 KIFAP3Q92845 792 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 DDX27Q96GQ7 796 aaKnown RBP14.66□□□□□ -0.06
ABCF1-206ENST00000479542 PPP1R10Q96QC0 940 aaKnown RBP14.66□□□□□ -0.06
ABCF1-206ENST00000479542 TMEM60Q9H2L4 133 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 CACNA1IQ9P0X4 2223 aa14.66□□□□□ -0.06
ABCF1-206ENST00000479542 OTOGLQ3ZCN5 2332 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 CASTOR2A6NHX0 329 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 TTLL13PA6NNM8 815 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 ECI2O75521 394 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 DCNP07585 359 aaKnown RBP14.65□□□□□ -0.06
ABCF1-206ENST00000479542 GLULP15104 373 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 TRAPPC10P48553 1259 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 SAFBQ15424 915 aaKnown RBP eCLIP14.65□□□□□ -0.06
ABCF1-206ENST00000479542 UPP1Q16831 310 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 HAUS3Q68CZ6 603 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 SLC8B1Q6J4K2 584 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 ALKAL1Q6UXT8 129 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 CEP57Q86XR8 500 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 GLYCTKQ8IVS8 523 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 MAML2Q8IZL2 1156 aaPredicted RBP14.65□□□□□ -0.06
ABCF1-206ENST00000479542 ZNF461Q8TAF7 563 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 DEPTORQ8TB45 409 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 BSNDQ8WZ55 320 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 RUBCNQ92622 972 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 CLDN23Q96B33 292 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 RPP25Q9BUL9 199 aaKnown RBP14.65□□□□□ -0.06
ABCF1-206ENST00000479542 FOXP1Q9H334 677 aaPredicted RBP14.65□□□□□ -0.06
ABCF1-206ENST00000479542 MAFFQ9ULX9 164 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 DOCK6Q96HP0 2047 aa14.65□□□□□ -0.06
ABCF1-206ENST00000479542 ARHGEF37A1IGU5 675 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 ARHGEF35A5YM69 484 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 SPTLC1O15269 473 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 NCAM2O15394 837 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 B3GAT3O94766 335 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 ABLIM3O94929 683 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 MYBP10242 640 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 OR1D2P34982 312 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 RPS9P46781 194 aaKnown RBP14.64□□□□□ -0.07
ABCF1-206ENST00000479542 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.071e-7■■■■□ 22.3
ABCF1-206ENST00000479542 PDIA5Q14554 519 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 MLF2Q15773 248 aaPredicted RBP14.64□□□□□ -0.07
ABCF1-206ENST00000479542 CD300LGQ6UXG3 332 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 NOSTRINQ8IVI9 506 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 GPR161Q8N6U8 529 aaKnown RBP14.64□□□□□ -0.07
ABCF1-206ENST00000479542 NECAB1Q8N987 351 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 SUMF1Q8NBK3 374 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 KCNG4Q8TDN1 519 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 RABGGTAQ92696 567 aa14.64□□□□□ -0.07
ABCF1-206ENST00000479542 NELL1Q92832 810 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms