RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 TMEM117Q9H0C3 514 aa8.13□□□□□ -1.11
SSR1-206ENST00000479365 RUBCNLQ9H714 662 aa8.13□□□□□ -1.11
SSR1-206ENST00000479365 C11orf16Q9NQ32 467 aa8.13□□□□□ -1.11
SSR1-206ENST00000479365 CYP26B1Q9NR63 512 aa8.13□□□□□ -1.11
SSR1-206ENST00000479365 RGL1Q9NZL6 768 aa8.13□□□□□ -1.11
SSR1-206ENST00000479365 CLEC1BQ9P126 229 aa8.13□□□□□ -1.11
SSR1-206ENST00000479365 SUCLA2Q9P2R7 463 aaPredicted RBP8.13□□□□□ -1.11
SSR1-206ENST00000479365 TMA7Q9Y2S6 64 aaKnown RBP8.13□□□□□ -1.11
SSR1-206ENST00000479365 HCN4Q9Y3Q4 1203 aa8.13□□□□□ -1.11
SSR1-206ENST00000479365 MYH9P35579 1960 aaKnown RBP8.13□□□□□ -1.11
SSR1-206ENST00000479365 FNDC1Q4ZHG4 1894 aaPredicted RBP8.13□□□□□ -1.11
SSR1-206ENST00000479365 PLXNA4Q9HCM2 1894 aa8.13□□□□□ -1.11
SSR1-206ENST00000479365 A0A0U1RQF3 1178 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 CDC14CA4D256 554 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 MEIS3P2A8K0S8 358 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 H3BM21 787 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 FSCN2O14926 492 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 MBTPS2O43462 519 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 NCK2O43639 380 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 GLP2RO95838 553 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 F11P03951 625 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 ZSCAN20P17040 1043 aaPredicted RBP8.12□□□□□ -1.11
SSR1-206ENST00000479365 XBP1P17861 261 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 BRD2P25440 801 aaKnown RBP8.12□□□□□ -1.11
SSR1-206ENST00000479365 MZF1P28698 734 aaPredicted RBP8.12□□□□□ -1.11
SSR1-206ENST00000479365 DNAJA1P31689 397 aaKnown RBP8.12□□□□□ -1.11
SSR1-206ENST00000479365 NRIP1P48552 1158 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 CYP4A11Q02928 519 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 ZP2Q05996 745 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 CTTNQ14247 550 aaKnown RBP8.12□□□□□ -1.11
SSR1-206ENST00000479365 SPOUT1Q5T280 376 aaKnown RBP8.12□□□□□ -1.11
SSR1-206ENST00000479365 NCAPH2Q6IBW4 605 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 RBM23Q86U06 439 aaKnown RBP8.12□□□□□ -1.11
SSR1-206ENST00000479365 RHPN2Q8IUC4 686 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 DIS3L2Q8IYB7 885 aaKnown RBP8.12□□□□□ -1.11
SSR1-206ENST00000479365 EFHBQ8N7U6 833 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 RNF169Q8NCN4 708 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 WASF1Q92558 559 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 LPPQ93052 612 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 TMEM143Q96AN5 459 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 MSLNLQ96KJ4 702 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 NLRP4Q96MN2 994 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 KIF2CQ99661 725 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 LXNQ9BS40 222 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 GCOM2Q9BZD3 368 aaPredicted RBP8.12□□□□□ -1.11
SSR1-206ENST00000479365 DHX33Q9H6R0 707 aaKnown RBP8.12□□□□□ -1.11
SSR1-206ENST00000479365 IFT122Q9HBG6 1241 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 AK5Q9Y6K8 562 aa8.12□□□□□ -1.11
SSR1-206ENST00000479365 A0A087WWV3 80 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 TLDC2A0PJX2 215 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 FAM86C2PA6NEL3 165 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 PI4K2BG5E9Z4 385 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 PER2O15055 1255 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 B4GALT3O60512 393 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 SLITRK3O94933 977 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 LAG3P18627 525 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 YWHABP31946 246 aaKnown RBP8.11□□□□□ -1.11
SSR1-206ENST00000479365 DNM2P50570 870 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 GUCY1B3Q02153 619 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 SMAD2Q15796 467 aaKnown RBP8.11□□□□□ -1.11
SSR1-206ENST00000479365 LONRF3Q496Y0 759 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 C8orf34Q49A92 452 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 KCNT2Q6UVM3 1135 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 ZNF410Q86VK4 478 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 TMEM173Q86WV6 379 aaPredicted RBP8.11□□□□□ -1.11
SSR1-206ENST00000479365 CCDC83Q8IWF9 413 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 C4orf19Q8IY42 314 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 THNSL1Q8IYQ7 743 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 LRRC43Q8N309 656 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 PRPF31Q8WWY3 499 aaKnown RBP8.11□□□□□ -1.11
SSR1-206ENST00000479365 CEP170P1Q96L14 293 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 FRMD6Q96NE9 622 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 MTMR9Q96QG7 549 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 NAP1L4Q99733 375 aaKnown RBP8.11□□□□□ -1.11
SSR1-206ENST00000479365 HSD17B14Q9BPX1 270 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 LRFN3Q9BTN0 628 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 TMEM60Q9H2L4 133 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 MINDY3Q9H8M7 445 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 XPNPEP1Q9NQW7 623 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 TLR9Q9NR96 1032 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 CHST12Q9NRB3 414 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 BARX2Q9UMQ3 279 aaPredicted RBP8.11□□□□□ -1.11
SSR1-206ENST00000479365 PCDHB12Q9Y5F1 795 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 COL4A3BPQ9Y5P4 624 aa8.11□□□□□ -1.11
SSR1-206ENST00000479365 HIDE1A8MVS5 230 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 NT5C1B-RDH14C9J2C7 533 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 EYA4O95677 639 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 EOMESO95936 686 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 PDGFAP04085 211 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 THBS1P07996 1170 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 SRGAP2CP0DJJ0 459 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 SFPQP23246 707 aaKnown RBP eCLIP8.1□□□□□ -1.11
SSR1-206ENST00000479365 HOXA11P31270 313 aaPredicted RBP8.1□□□□□ -1.11
SSR1-206ENST00000479365 TXKP42681 527 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 NDUFV1P49821 464 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 POLGP54098 1239 aaPredicted RBP8.1□□□□□ -1.11
SSR1-206ENST00000479365 RACK1P63244 317 aaKnown RBP8.1□□□□□ -1.11
SSR1-206ENST00000479365 CDC42EP1Q00587 391 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 UBE3AQ05086 875 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 LAMTOR4Q0VGL1 99 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms