RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 ANKEF1Q9NU02 776 aa12.2□□□□□ -0.46
HDLBP-237ENST00000479169 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
HDLBP-237ENST00000479169 SPATA6Q9NWH7 488 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-237ENST00000479169 HCFC1R1Q9NWW0 138 aa12.2□□□□□ -0.46
HDLBP-237ENST00000479169 USP20Q9Y2K6 914 aa12.2□□□□□ -0.46
HDLBP-237ENST00000479169 ZFP37Q9Y6Q3 630 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-237ENST00000479169 ACACBO00763 2458 aa12.2□□□□□ -0.46
HDLBP-237ENST00000479169 KINO60870 393 aaKnown RBP12.19□□□□□ -0.46
HDLBP-237ENST00000479169 RECQL4O94761 1208 aa12.19□□□□□ -0.46
HDLBP-237ENST00000479169 HNRNPA1P09651 372 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDLBP-237ENST00000479169 SLC44A4Q53GD3 710 aa12.19□□□□□ -0.46
HDLBP-237ENST00000479169 SLC7A14Q8TBB6 771 aa12.19□□□□□ -0.46
HDLBP-237ENST00000479169 ING5Q8WYH8 240 aa12.19□□□□□ -0.46
HDLBP-237ENST00000479169 TNFRSF25Q93038 417 aa12.19□□□□□ -0.46
HDLBP-237ENST00000479169 DDX23Q9BUQ8 820 aaKnown RBP12.19□□□□□ -0.46
HDLBP-237ENST00000479169 TM6SF1Q9BZW5 370 aa12.19□□□□□ -0.46
HDLBP-237ENST00000479169 PDZD7Q9H5P4 517 aa12.19□□□□□ -0.46
HDLBP-237ENST00000479169 SNTG2Q9NY99 539 aa12.19□□□□□ -0.46
HDLBP-237ENST00000479169 ORC3Q9UBD5 711 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-237ENST00000479169 PCDHA12Q9UN75 941 aa12.19□□□□□ -0.46
HDLBP-237ENST00000479169 CITO14578 2027 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 TICRRQ7Z2Z1 1910 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 FAM170BA6NMN3 283 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 LAMTOR5O43504 91 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 XYLBO75191 536 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 CDKL5O76039 1030 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 CTDNEP1O95476 244 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 EDN1P05305 212 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 XBP1P17861 261 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 HOXA9P31269 272 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 KRT2P35908 639 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 NAB2Q15742 525 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 CALCRLQ16602 461 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 RSPO4Q2I0M5 234 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-237ENST00000479169 AXDND1Q5T1B0 1012 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-237ENST00000479169 PPP4R3CPQ6ZMV5 832 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 MTSS1LQ765P7 747 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 NOSTRINQ8IVI9 506 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 NPAS3Q8IXF0 933 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 BSNDQ8WZ55 320 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 BCO2Q9BYV7 579 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 TTC12Q9H892 705 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-237ENST00000479169 DLL3Q9NYJ7 618 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 TPCN1Q9ULQ1 816 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 RALGAPA1Q6GYQ0 2036 aa12.18□□□□□ -0.46
HDLBP-237ENST00000479169 N4BP3O15049 544 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 THP07101 528 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 LIG1P18858 919 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 TARSP26639 723 aaKnown RBP12.17□□□□□ -0.46
HDLBP-237ENST00000479169 OR1D2P34982 312 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 TXKP42681 527 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 FOSBP53539 338 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 PRKCQQ04759 706 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 CSTF1Q05048 431 aaKnown RBP12.17□□□□□ -0.46
HDLBP-237ENST00000479169 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 PABPC1LQ4VXU2 614 aaKnown RBP12.17□□□□□ -0.46
HDLBP-237ENST00000479169 EEF1DP3Q658K8 133 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 CDCA2Q69YH5 1023 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-237ENST00000479169 POTEHQ6S545 545 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 RSPO2Q6UXX9 243 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-237ENST00000479169 TPRG1Q6ZUI0 275 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 PLA2G2FQ9BZM2 168 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 FZD8Q9H461 694 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 LTB4R2Q9NPC1 389 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 PRMT7Q9NVM4 692 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-237ENST00000479169 NCDNQ9UBB6 729 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 DNMT3BQ9UBC3 853 aaKnown RBP12.17□□□□□ -0.46
HDLBP-237ENST00000479169 GDAQ9Y2T3 454 aa12.17□□□□□ -0.46
HDLBP-237ENST00000479169 MAP1BP46821 2468 aaKnown RBP12.16□□□□□ -0.46
HDLBP-237ENST00000479169 I3L4J1 428 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 SPTLC1O15269 473 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 NEMFO60524 1076 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 PFKFB2O60825 505 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 PRKCBP05771 671 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 FDPSP14324 419 aaKnown RBP12.16□□□□□ -0.46
HDLBP-237ENST00000479169 RAB33AQ14088 237 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 FAM187BQ17R55 369 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 SLC5A9Q2M3M2 681 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 ZNF528Q3MIS6 628 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 GLRA4Q5JXX5 417 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
HDLBP-237ENST00000479169 TSSK4Q6SA08 328 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-237ENST00000479169 ZBTB8OSQ8IWT0 167 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 MCRS1Q96EZ8 462 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 PRIMPOLQ96LW4 560 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 TMEM60Q9H2L4 133 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 FBXO4Q9UKT5 387 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 CDY1Q9Y6F8 540 aa12.16□□□□□ -0.46
HDLBP-237ENST00000479169 PDCD11Q14690 1871 aaKnown RBP12.15□□□□□ -0.46
HDLBP-237ENST00000479169 COL4A2P08572 1712 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 MED24O75448 989 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 RHOP08100 348 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 POU2F2P09086 479 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 CEBPBP17676 345 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 ATP2B1P20020 1258 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 FGFR3P22607 806 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 TKTP29401 623 aaKnown RBP12.15□□□□□ -0.46
HDLBP-237ENST00000479169 PFKPQ01813 784 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms