RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 AZI2Q9H6S1 392 aa11.58□□□□□ -0.55
VPS52-217ENST00000478934 ANKEF1Q9NU02 776 aa11.58□□□□□ -0.55
VPS52-217ENST00000478934 CTNND1O60716 968 aaKnown RBP11.58□□□□□ -0.56
VPS52-217ENST00000478934 CLSTN1O94985 981 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 CYP1A2P05177 515 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 EDN1P05305 212 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 RRM1P23921 792 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 NF2P35240 595 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 IFNAR2P48551 515 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 GMPSP49915 693 aaPredicted RBP11.58□□□□□ -0.56
VPS52-217ENST00000478934 PDE6CP51160 858 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 GPC3P51654 580 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 MNAT1P51948 309 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 HADHBP55084 474 aaKnown RBP11.58□□□□□ -0.56
VPS52-217ENST00000478934 RUFY4Q6ZNE9 571 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 JDP2Q8WYK2 163 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 MFSD14AQ96MC6 490 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 HEMGNQ9BXL5 484 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 POLR3FQ9H1D9 316 aaPredicted RBP11.58□□□□□ -0.56
VPS52-217ENST00000478934 CHST7Q9NS84 486 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 FER1L6Q2WGJ9 1857 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 DOCK5Q9H7D0 1870 aa11.58□□□□□ -0.56
VPS52-217ENST00000478934 HARSP12081 509 aaKnown RBP11.57□□□□□ -0.56
VPS52-217ENST00000478934 GZMAP12544 262 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 ATP4AP20648 1035 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 COILP38432 576 aaPredicted RBP11.57□□□□□ -0.56
VPS52-217ENST00000478934 VPS41P49754 854 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 ACTR2P61160 394 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 PRKCEQ02156 737 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 BYSLQ13895 437 aaKnown RBP11.57□□□□□ -0.56
VPS52-217ENST00000478934 SEL1L2Q5TEA6 688 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 MMS22LQ6ZRQ5 1243 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 OTUD6AQ7L8S5 288 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 TEX2Q8IWB9 1127 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 CCDC13Q8IYE1 715 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 WRNIP1Q96S55 665 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 DDX23Q9BUQ8 820 aaKnown RBP11.57□□□□□ -0.56
VPS52-217ENST00000478934 OSBPL7Q9BZF2 842 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 EFCC1Q9HA90 598 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 ANAPC7Q9UJX3 599 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 DIS3Q9Y2L1 958 aaKnown RBP11.57□□□□□ -0.56
VPS52-217ENST00000478934 COQ4Q9Y3A0 265 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 UMODL1Q5DID0 1318 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 SYNGAP1Q96PV0 1343 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 ZNF541Q9H0D2 1346 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 TTLL13PA6NNM8 815 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 MIF4GDA9UHW6 222 aaKnown RBP11.57□□□□□ -0.56
VPS52-217ENST00000478934 NFKBIEO00221 500 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 DNM1LO00429 736 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 TP73O15350 636 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 CHN1P15882 459 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 CCND2P30279 289 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 GJC1P36383 396 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 BACE1P56817 501 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 CNTN2Q02246 1040 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 MTMR3Q13615 1198 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 ACAD10Q6JQN1 1059 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 ANKS1BQ7Z6G8 1248 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 CPLX4Q7Z7G2 160 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 GPD1LQ8N335 351 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 REPS2Q8NFH8 660 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 PSPC1Q8WXF1 523 aaKnown RBP11.57□□□□□ -0.56
VPS52-217ENST00000478934 SEC16BQ96JE7 1060 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 CABS1Q96KC9 395 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 RPS6KC1Q96S38 1066 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 NAP1L3Q99457 506 aaPredicted RBP11.57□□□□□ -0.56
VPS52-217ENST00000478934 MLXIPLQ9NP71 852 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 GGT7Q9UJ14 662 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 ZNF214Q9UL59 606 aaPredicted RBP11.57□□□□□ -0.56
VPS52-217ENST00000478934 EXOC7Q9UPT5 735 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 R3HDM2Q9Y2K5 976 aaKnown RBP11.57□□□□□ -0.56
VPS52-217ENST00000478934 PSME4Q14997 1843 aa11.57□□□□□ -0.56
VPS52-217ENST00000478934 TNNI1P19237 187 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 SFNP31947 248 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 CHRNA3P32297 505 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 ADCY1Q08828 1119 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 BIRC3Q13489 604 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 DHX34Q14147 1143 aaKnown RBP11.56□□□□□ -0.56
VPS52-217ENST00000478934 CLEC16AQ2KHT3 1053 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 TDRD10Q5VZ19 366 aaKnown RBP11.56□□□□□ -0.56
VPS52-217ENST00000478934 TMEM130Q8N3G9 435 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 ARFGAP2Q8N6H7 521 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 C1orf131Q8NDD1 294 aaKnown RBP11.56□□□□□ -0.56
VPS52-217ENST00000478934 FBXL18Q96ME1 805 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 WNT8AQ9H1J5 351 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 PABPC3Q9H361 631 aaKnown RBP11.56□□□□□ -0.56
VPS52-217ENST00000478934 CD248Q9HCU0 757 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 JPH1Q9HDC5 661 aaPredicted RBP11.56□□□□□ -0.56
VPS52-217ENST00000478934 A1CFQ9NQ94 594 aaKnown RBP11.56□□□□□ -0.56
VPS52-217ENST00000478934 PDLIM7Q9NR12 457 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 CYP26B1Q9NR63 512 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 KLHL11Q9NVR0 708 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 GTF3C4Q9UKN8 822 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 MROH7Q68CQ1 1323 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 GOLGA6L7A0A1B0GV03 622 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 FAM187AA6NFU0 413 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 MAPK13O15264 365 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 PTPRAP18433 802 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 SCP2P22307 547 aa11.56□□□□□ -0.56
VPS52-217ENST00000478934 CHKAP35790 457 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms