RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZAR1LA6NP61 321 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 FZD9O00144 591 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 AKAP10O43572 662 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 KDM1AO60341 852 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 LTA4HP09960 611 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 ZEB1P37275 1124 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 PIN1Q13526 163 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 HSP90AB2PQ58FF8 381 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 CCDC178Q5BJE1 867 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 STRIP1Q5VSL9 837 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 ZBTB46Q86UZ6 589 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 PLXDC1Q8IUK5 500 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 FMNL3Q8IVF7 1028 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 CMTR2Q8IYT2 770 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 RNF169Q8NCN4 708 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 MDM1Q8TC05 714 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 VOPP1Q96AW1 172 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 TEX101Q9BY14 249 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 CDH19Q9H159 772 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 TOR3AQ9H497 397 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 TOPORSQ9NS56 1045 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 C14orf119Q9NWQ9 140 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 PRSS50Q9UI38 385 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 KCNG1Q9UIX4 513 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 CLCA2Q9UQC9 943 aa5.35□□□□□ -1.55
CDC42BPA-212ENST00000478573 COL4A3Q01955 1670 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 WASHC2AQ641Q2 1341 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 UNC119BA6NIH7 251 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 KIAA0355O15063 1070 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 TSPAN6O43657 245 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 RBP3P10745 1247 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 RAB27AP51159 221 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 MANFP55145 182 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 MRPS21P82921 87 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 ANKS6Q68DC2 871 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 OLFML1Q6UWY5 402 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 FRMD7Q6ZUT3 714 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 CAVIN3Q969G5 261 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 ORAI2Q96SN7 254 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 TCF7L1Q9HCS4 588 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 NOC2LQ9Y3T9 749 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 NUMBLQ9Y6R0 609 aa5.34□□□□□ -1.55
CDC42BPA-212ENST00000478573 ITGA10O75578 1167 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 ABLIM3O94929 683 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 LPLP06858 475 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 IARSP41252 1262 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 TRIM25Q14258 630 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 PPP2R5AQ15172 486 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 ABCB5Q2M3G0 1257 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 EFCAB12Q6NXP0 572 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 ABHD15Q6UXT9 468 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 SYT12Q8IV01 421 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 CPEB3Q8NE35 698 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 C1orf162Q8NEQ5 155 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 OR14C36Q8NHC7 312 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 LMBR1Q8WVP7 490 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 TFAP2CQ92754 450 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 HOOK2Q96ED9 719 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 FUBP3Q96I24 572 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 PHACTR3Q96KR7 559 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 ACAP3Q96P50 834 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 CHST2Q9Y4C5 530 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 TNFRSF18Q9Y5U5 241 aa5.33□□□□□ -1.56
CDC42BPA-212ENST00000478573 FANCD2Q9BXW9 1451 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 GAGE12BA1L429 117 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 GAGE12HA6NDE8 117 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 TMEM200CA6NKL6 621 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 B5MCH6 92 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 MASP2O00187 686 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 ZNF185O15231 689 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 TMEM127O75204 238 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 SPATA31D3P0C874 917 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 LMO1P25800 156 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 IL12RB1P42701 662 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 AVPR1BP47901 424 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 GUCY1B3Q02153 619 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 PDCD1Q15116 288 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 CSRP2Q16527 193 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 PTPN21Q16825 1174 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 CCDC142Q17RM4 750 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 BEAN1Q3B7T3 259 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 PDCD4Q53EL6 469 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 SPATA31D4Q6ZUB0 917 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 NOL8Q76FK4 1167 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 GPRIN1Q7Z2K8 1008 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 ADGRG3Q86Y34 549 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 ARHGEF19Q8IW93 802 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 C8orf48Q96LL4 319 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 RTFDC1Q9BY42 306 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 PRDM12Q9H4Q4 367 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 AASDHPPTQ9NRN7 309 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 GEMIN8Q9NWZ8 242 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 ZIM2Q9NZV7 527 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 TMPRSS11EQ9UL52 423 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 MAP3K2Q9Y2U5 619 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 USP15Q9Y4E8 981 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 WDR97A6NE52 1622 aa5.32□□□□□ -1.56
CDC42BPA-212ENST00000478573 DNMBPQ6XZF7 1577 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 RFPL1O75677 317 aa5.31□□□□□ -1.56
CDC42BPA-212ENST00000478573 SCGB1D2O95969 90 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms