RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 MCM2P49736 904 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 SMTNP53814 917 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 TCF15Q12870 199 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 STRN3Q13033 797 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 ZNF568Q3ZCX4 644 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 GLYCTKQ8IVS8 523 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 C4orf32Q8N8J7 132 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 HASPINQ8TF76 798 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 DDX27Q96GQ7 796 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 CDK5RAP3Q96JB5 506 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 B3GALT6Q96L58 329 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 RTP3Q9BQQ7 232 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 KIFC3Q9BVG8 833 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 TMEM134Q9H6X4 195 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 KMT5AQ9NQR1 393 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 KCND2Q9NZV8 630 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 FBXW11Q9UKB1 542 aa15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.87■□□□□ 0.13
SMARCE1-209ENST00000478349 RFPL2O75678 378 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 B3GAT3O94766 335 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 PDGFBP01127 241 aaPredicted RBP15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 GRM5P41594 1212 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 PEX3P56589 373 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 NBR1Q14596 966 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 RTP2Q5QGT7 225 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 PPM1LQ5SGD2 360 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 LILRA6Q6PI73 481 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 DCLRE1AQ6PJP8 1040 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 FLCNQ8NFG4 579 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 TCHPQ9BT92 498 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 PCDHB6Q9Y5E3 794 aa15.86■□□□□ 0.13
SMARCE1-209ENST00000478349 HIP1RO75146 1068 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 SPATA31D3P0C874 917 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 MCF2P10911 925 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 RPL17P18621 184 aaKnown RBP15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 SCP2P22307 547 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 NPTX2P47972 431 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 C8orf34Q49A92 452 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 EEF1DP3Q658K8 133 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 POTEHQ6S545 545 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 PRSS55Q6UWB4 352 aaPredicted RBP15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 SPATA31D4Q6ZUB0 917 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 ANKS3Q6ZW76 656 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 GET4Q7L5D6 327 aaPredicted RBP15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 RABGGTAQ92696 567 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 ZNF707Q96C28 371 aaPredicted RBP15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 WNT16Q9UBV4 365 aa15.85■□□□□ 0.13
SMARCE1-209ENST00000478349 TTLL13PA6NNM8 815 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 E9PMD0 336 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 SLC26A4O43511 780 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 BMP15O95972 392 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 C8AP07357 584 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 POU2F2P09086 479 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 SRFP11831 508 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 AOC1P19801 751 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 FSHRP23945 695 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 GUCY2CP25092 1073 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 ZRSR1Q15695 479 aaKnown RBP15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 ECM1Q16610 540 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 UVSSAQ2YD98 709 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 NT5DC1Q5TFE4 455 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 ARL6IP4Q66PJ3 421 aaKnown RBP15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 MTSS1LQ765P7 747 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 SIX5Q8N196 739 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 LNX1Q8TBB1 728 aaPredicted RBP15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 PPP1R10Q96QC0 940 aaKnown RBP15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 KIF2CQ99661 725 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 ACO2Q99798 780 aaKnown RBP15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 PAAF1Q9BRP4 392 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 ARHGAP28Q9P2N2 729 aa15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.84■□□□□ 0.13
SMARCE1-209ENST00000478349 STK25O00506 426 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 MYBP10242 640 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 LAMP2P13473 410 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 FGFR3P22607 806 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 TOB1P50616 345 aaPredicted RBP15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 ATP2C1P98194 919 aaPredicted RBP15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 RAB33AQ14088 237 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 NAB2Q15742 525 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 GLRA4Q5JXX5 417 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 RINT1Q6NUQ1 792 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 MPZL3Q6UWV2 235 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 TMEM105Q8N8V8 129 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 SPIRE2Q8WWL2 714 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 AK8Q96MA6 479 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 ACAP3Q96P50 834 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 CLSTN3Q9BQT9 956 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 CDT1Q9H211 546 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 SMOC2Q9H3U7 446 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 LARSQ9P2J5 1176 aaKnown RBP15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 MTRRQ9UBK8 725 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 NUB1Q9Y5A7 615 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 BACE2Q9Y5Z0 518 aa15.83■□□□□ 0.12
SMARCE1-209ENST00000478349 DENND4AQ7Z401 1863 aa15.82■□□□□ 0.12
SMARCE1-209ENST00000478349 SMIM28A0A1B0GU29 152 aa15.82■□□□□ 0.12
SMARCE1-209ENST00000478349 H0Y858 1186 aa15.82■□□□□ 0.12
SMARCE1-209ENST00000478349 TOM1L1O75674 476 aa15.82■□□□□ 0.12
SMARCE1-209ENST00000478349 PLS3P13797 630 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms