RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 NAMPTP43490 491 aa12.96□□□□□ -0.33
CPSF7-211ENST00000477890 ELAVL2Q12926 359 aaKnown RBP12.96□□□□□ -0.33
CPSF7-211ENST00000477890 PPP2R5AQ15172 486 aa12.96□□□□□ -0.33
CPSF7-211ENST00000477890 NAB2Q15742 525 aa12.96□□□□□ -0.33
CPSF7-211ENST00000477890 SPECC1Q5M775 1068 aa12.96□□□□□ -0.33
CPSF7-211ENST00000477890 PPM1LQ5SGD2 360 aa12.96□□□□□ -0.33
CPSF7-211ENST00000477890 EEF1DP3Q658K8 133 aa12.96□□□□□ -0.33
CPSF7-211ENST00000477890 ADSSL1Q8N142 457 aa12.96□□□□□ -0.33
CPSF7-211ENST00000477890 KIFC3Q9BVG8 833 aa12.96□□□□□ -0.33
CPSF7-211ENST00000477890 CCDC113Q9H0I3 377 aa12.96□□□□□ -0.33
CPSF7-211ENST00000477890 ARHGEF3Q9NR81 526 aa12.96□□□□□ -0.33
CPSF7-211ENST00000477890 POLIQ9UNA4 740 aa12.96□□□□□ -0.33
CPSF7-211ENST00000477890 ZFP37Q9Y6Q3 630 aaPredicted RBP12.96□□□□□ -0.33
CPSF7-211ENST00000477890 CCL16O15467 120 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 ADAM12O43184 909 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 DCNP07585 359 aaKnown RBP12.95□□□□□ -0.34
CPSF7-211ENST00000477890 HNRNPA1P09651 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
CPSF7-211ENST00000477890 NTHL1P78549 312 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 DCAF4L1Q3SXM0 396 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 GLRA4Q5JXX5 417 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 HAUS3Q68CZ6 603 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 PHLDB3Q6NSJ2 640 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 PDXDC1Q6P996 788 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 DCLRE1AQ6PJP8 1040 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 FGF14Q92915 247 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 C8orf76Q96K31 380 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 IFT74Q96LB3 600 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 RPP25Q9BUL9 199 aaKnown RBP12.95□□□□□ -0.34
CPSF7-211ENST00000477890 POLD4Q9HCU8 107 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 SLC2A4RGQ9NR83 387 aa12.95□□□□□ -0.34
CPSF7-211ENST00000477890 XYLBO75191 536 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 HOXA9P31269 272 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 OR1D2P34982 312 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 CCT6AP40227 531 aaKnown RBP12.94□□□□□ -0.34
CPSF7-211ENST00000477890 ORC2Q13416 577 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-211ENST00000477890 PARM1Q6UWI2 310 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.94□□□□□ -0.34
CPSF7-211ENST00000477890 CCDC83Q8IWF9 413 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 SLC7A14Q8TBB6 771 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 KCNG4Q8TDN1 519 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 BHMT2Q9H2M3 363 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 CDH7Q9ULB5 785 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 SIT1Q9Y3P8 196 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 SPTBN4Q9H254 2564 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 MIA3Q5JRA6 1907 aa12.94□□□□□ -0.34
CPSF7-211ENST00000477890 B3GAT3O94766 335 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 MUTP22033 750 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 IGFBP6P24592 240 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-211ENST00000477890 CLCNKBP51801 687 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 EFNA5P52803 228 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 GPC5P78333 572 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 GNL2Q13823 731 aaKnown RBP12.93□□□□□ -0.34
CPSF7-211ENST00000477890 RAB33AQ14088 237 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 ECM1Q16610 540 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 TTC38Q5R3I4 469 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 AXDND1Q5T1B0 1012 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-211ENST00000477890 NT5DC1Q5TFE4 455 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 ATF7IP2Q5U623 682 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 ITFG1Q8TB96 612 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 KIFAP3Q92845 792 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 FGF13Q92913 245 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 PPP1R10Q96QC0 940 aaKnown RBP12.93□□□□□ -0.34
CPSF7-211ENST00000477890 FOXQ1Q9C009 403 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 FOXP1Q9H334 677 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-211ENST00000477890 MTRRQ9UBK8 725 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 CDY1Q9Y6F8 540 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 R4GN57 208 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 NOTCH4Q99466 2003 aa12.93□□□□□ -0.34
CPSF7-211ENST00000477890 VPS13AQ96RL7 3174 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 TMEM189-UBE2V1I3L0A0 370 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 K7ERI5 159 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 FGFR3P22607 806 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 TKTP29401 623 aaKnown RBP12.92□□□□□ -0.34
CPSF7-211ENST00000477890 RBM25P49756 843 aaKnown RBP12.92□□□□□ -0.34
CPSF7-211ENST00000477890 SNW1Q13573 536 aaKnown RBP12.92□□□□□ -0.34
CPSF7-211ENST00000477890 UVSSAQ2YD98 709 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 MTSS1LQ765P7 747 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 APBB1IPQ7Z5R6 666 aaPredicted RBP12.92□□□□□ -0.34
CPSF7-211ENST00000477890 C1orf210Q8IVY1 113 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 PJA1Q8NG27 643 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 SHDQ96IW2 340 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 GOLGA2P5Q9HBQ8 144 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 HCFC1R1Q9NWW0 138 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 DLGAP2Q9P1A6 1054 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 LRWD1Q9UFC0 647 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 LIMCH1Q9UPQ0 1083 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 KIAA1024Q9UPX6 916 aa12.92□□□□□ -0.34
CPSF7-211ENST00000477890 DMDP11532 3685 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 CCDC169A6NNP5 214 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 I3L4J1 428 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 TRAPPC3O43617 180 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 EIF5BO60841 1220 aaKnown RBP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 LRRN2O75325 713 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 LMNAP02545 664 aaKnown RBP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 BRCC3P46736 316 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 ID4P47928 161 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 FXR2P51116 673 aaKnown RBP eCLIP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 YARSP54577 528 aaKnown RBP12.91□□□□□ -0.34
CPSF7-211ENST00000477890 STARD6P59095 220 aa12.91□□□□□ -0.34
CPSF7-211ENST00000477890 FOXK2Q01167 660 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms