RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 AP3B2Q13367 1082 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 RAB33AQ14088 237 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 LRRC32Q14392 662 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 PRSS36Q5K4E3 855 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 DGKKQ5KSL6 1271 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 SMYD5Q6GMV2 418 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 VITQ6UXI7 678 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 NCOA7Q8NI08 942 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 NLRP4Q96MN2 994 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 ZSWIM3Q96MP5 696 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 ASB16Q96NS5 453 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 DIAPH3Q9NSV4 1193 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 KLK13Q9UKR3 277 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 HES2Q9Y543 173 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 MYH15Q9Y2K3 1946 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 CELSR3Q9NYQ7 3312 aa8.21□□□□□ -1.1
SPTLC1-205ENST00000477888 LNP1A1A4G5 178 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 TMEM150BA6NC51 233 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 SMCO2A6NFE2 343 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 E7EWF7 191 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 HIP1O00291 1037 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 EXTL3O43909 919 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 PTPN2P17706 415 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 RXRAP19793 462 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 PXNP49023 591 aaPredicted RBP8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 ADCY7P51828 1080 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 SETQ01105 290 aaPredicted RBP8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 CCINQ13939 588 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 PSMD5Q16401 504 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 COL28A1Q2UY09 1125 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 PLK5Q496M5 336 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 MTERF2Q49AM1 385 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 KIAA1211LQ6NV74 962 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 C1orf228Q6PIY5 440 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 TXNDC11Q6PKC3 985 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 TMTC3Q6ZXV5 915 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 SRGAP1Q7Z6B7 1085 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 RALYLQ86SE5 291 aaKnown RBP8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 MB21D2Q8IYB1 491 aaPredicted RBP8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 SYNPOQ8N3V7 929 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 SMARCD2Q92925 531 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 LENG9Q96B70 501 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 TCEAL4Q96EI5 215 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 MSANTD3Q96H12 275 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 SH2D3AQ9BRG2 576 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 PAAF1Q9BRP4 392 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 EIF2AQ9BY44 585 aaKnown RBP8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 RCAN3Q9UKA8 241 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 GIT1Q9Y2X7 761 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 SF3B1O75533 1304 aaKnown RBP eCLIP8.2□□□□□ -1.14e-7■■■■■ 125.7
SPTLC1-205ENST00000477888 DOCK6Q96HP0 2047 aa8.2□□□□□ -1.1
SPTLC1-205ENST00000477888 BCLAF3A2AJT9 711 aaKnown RBP8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 WDR27A2RRH5 827 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 MYBPHLA2RUH7 354 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 ZNF263O14978 683 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 CCDC192P0DO97 292 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 CIITAP33076 1130 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 OR1D2P34982 312 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 VIPR2P41587 438 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 CCR2P41597 374 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 NAPAP54920 295 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 HSP90AA2PQ14568 343 aaPredicted RBP8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 XKR3Q5GH77 459 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 FAM171A1Q5VUB5 890 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 PPP1R18Q6NYC8 613 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 CEP57Q86XR8 500 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 MFSD6LQ8IWD5 586 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 TMTC2Q8N394 836 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 FANCBQ8NB91 859 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 GLIS3Q8NEA6 775 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 DEFB124Q8NES8 71 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 DEPDC1BQ8WUY9 529 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 MTA3Q9BTC8 594 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 DUSP15Q9H1R2 295 aaPredicted RBP8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 OSBPL3Q9H4L5 887 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 C8orf33Q9H7E9 229 aaPredicted RBP8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 TRPV4Q9HBA0 871 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 CACNG4Q9UBN1 327 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 TCEAL9Q9UHQ7 104 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 NAV2Q8IVL1 2488 aa8.19□□□□□ -1.1
SPTLC1-205ENST00000477888 ARHGEF37A1IGU5 675 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 ADAMTS3O15072 1205 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 EDIL3O43854 480 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 MOSPD3O75425 235 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 CAVIN2O95810 425 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 SRGAP2CP0DJJ0 459 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 CALM1P0DP23 149 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 CALM2P0DP24 149 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 CALM3P0DP25 149 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 SFNP31947 248 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 SOX9P48436 509 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 PTH1RQ03431 593 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 SPIRE1Q08AE8 756 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 GRIK3Q13003 919 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 PRR16Q569H4 304 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 JAKMIP3Q5VZ66 844 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 PKN3Q6P5Z2 889 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 PDXDC1Q6P996 788 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 ANO5Q75V66 913 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 PRPF31Q8WWY3 499 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms