RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 CNNM3Q8NE01 707 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 LNX1Q8TBB1 728 aaPredicted RBP10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 BBC3Q96PG8 261 aaPredicted RBP10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 APOL6Q9BWW8 343 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 IFT122Q9HBG6 1241 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 TRPV5Q9NQA5 729 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 DISC1Q9NRI5 854 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 KLK13Q9UKR3 277 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 MSRB2Q9Y3D2 182 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 HES2Q9Y543 173 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 IPPQ9Y573 584 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 SPAG17Q6Q759 2223 aa10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 SF3B1O75533 1304 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMARCB1-206ENST00000477836 IGKV6-21A0A0C4DH24 114 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 E7EWF7 191 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 NRG2O14511 850 aaPredicted RBP10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 SLC27A2O14975 620 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 ADAM12O43184 909 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 KALRNO60229 2985 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 PSMC3P17980 439 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 HOXA6P31267 233 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 HOXA11P31270 313 aaPredicted RBP10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 SETQ01105 290 aaPredicted RBP10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 AP3B2Q13367 1082 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 RABEP1Q15276 862 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 UVSSAQ2YD98 709 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 FAM78AQ5JUQ0 283 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 CREB3L3Q68CJ9 461 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 VITQ6UXI7 678 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 NFXL1Q6ZNB6 911 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 PROSER1Q86XN7 944 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 HASPINQ8TF76 798 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 TTPALQ9BTX7 342 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 EIF2AQ9BY44 585 aaKnown RBP10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 CACNG4Q9UBN1 327 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 TAF6LQ9Y6J9 622 aa10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 PDCD11Q14690 1871 aaKnown RBP10.83□□□□□ -0.68
SMARCB1-206ENST00000477836 SMCO2A6NFE2 343 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 CCDC69A6NI79 296 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 CYSRT1A8MQ03 144 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 ZNF263O14978 683 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 CHMP2AO43633 222 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 CALM1P0DP23 149 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 CALM2P0DP24 149 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 CALM3P0DP25 149 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 CSRP1P21291 193 aaKnown RBP10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 CLK2P49760 499 aaKnown RBP10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 NECTIN1Q15223 517 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 WDR44Q5JSH3 913 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 DGKKQ5KSL6 1271 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 FAM171A1Q5VUB5 890 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 JAKMIP3Q5VZ66 844 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 DEFB124Q8NES8 71 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 ADAM32Q8TC27 787 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 CSGALNACT1Q8TDX6 532 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 PIK3R5Q8WYR1 880 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 ASB16Q96NS5 453 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 CEP89Q96ST8 783 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 NIFKQ9BYG3 293 aaKnown RBP10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 MINDY3Q9H8M7 445 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 SNX14Q9Y5W7 946 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 TENM4Q6N022 2769 aa10.82□□□□□ -0.68
SMARCB1-206ENST00000477836 LNP1A1A4G5 178 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 SLC38A8A6NNN8 435 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 EXTL3O43909 919 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 MAFO75444 373 aaPredicted RBP10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 CYP3A4P08684 503 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 SRGAP2CP0DJJ0 459 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 PTPN2P17706 415 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 OR1D2P34982 312 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 VIPR2P41587 438 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 SOX9P48436 509 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 KPNA1P52294 538 aaPredicted RBP10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 CREB5Q02930 508 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 KRT32Q14532 448 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 HSP90AA2PQ14568 343 aaPredicted RBP10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 PRR16Q569H4 304 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 PPP1R18Q6NYC8 613 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 C1orf228Q6PIY5 440 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 TMTC3Q6ZXV5 915 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 SRGAP1Q7Z6B7 1085 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 DEPDC1BQ8WUY9 529 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 KCNB2Q92953 911 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 TCEAL4Q96EI5 215 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 MSANTD3Q96H12 275 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 ZC3H10Q96K80 434 aaKnown RBP10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 KIF2CQ99661 725 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 PAAF1Q9BRP4 392 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 MKNK1Q9BUB5 465 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 TMEM9BQ9NQ34 198 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 COL4A3BPQ9Y5P4 624 aa10.81□□□□□ -0.68
SMARCB1-206ENST00000477836 CAVIN2O95810 425 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 AKAP5P24588 427 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 MLLT6P55198 1093 aaPredicted RBP10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 FGD1P98174 961 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 RAB33AQ14088 237 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 UAP1L1Q3KQV9 507 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 PLK5Q496M5 336 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 XKR3Q5GH77 459 aa10.8□□□□□ -0.68
SMARCB1-206ENST00000477836 PRSS36Q5K4E3 855 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms