RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 PPP1R13LQ8WUF5 828 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 CYTH2Q99418 400 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 STK33Q9BYT3 514 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 PITPNM3Q9BZ71 974 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 SHCBP1LQ9BZQ2 653 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 HOMER3Q9NSC5 361 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 KLHL14Q9P2G3 628 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 ZNF70Q9UC06 446 aaPredicted RBP10.42□□□□□ -0.74
CMC1-209ENST00000477739 MAST2Q6P0Q8 1798 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 CCT8L1PA6NM43 557 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 NSFP46459 744 aaKnown RBP10.42□□□□□ -0.74
CMC1-209ENST00000477739 SKOR1P84550 965 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 HHATQ5VTY9 493 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 TAOK1Q7L7X3 1001 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 TRPM8Q7Z2W7 1104 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 SYN2Q92777 582 aaPredicted RBP10.42□□□□□ -0.74
CMC1-209ENST00000477739 ERP27Q96DN0 273 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 PCDHB18PQ96TA0 734 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 PCDHA2Q9Y5H9 948 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 GJA3Q9Y6H8 435 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 DDX60LQ5H9U9 1706 aaKnown RBP10.42□□□□□ -0.74
CMC1-209ENST00000477739 EME2A4GXA9 379 aaPredicted RBP10.42□□□□□ -0.74
CMC1-209ENST00000477739 ELF1P32519 619 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 RWDD2BP57060 319 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 LACTBP83111 547 aaPredicted RBP10.42□□□□□ -0.74
CMC1-209ENST00000477739 BBS9Q3SYG4 887 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 STYK1Q6J9G0 422 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 OTOP1Q7RTM1 612 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 LRRC57Q8N9N7 239 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 SCFD2Q8WU76 684 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 TMEM143Q96AN5 459 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 LENG9Q96B70 501 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 SPDL1Q96EA4 605 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 SGSM3Q96HU1 749 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 PABPC3Q9H361 631 aaKnown RBP10.42□□□□□ -0.74
CMC1-209ENST00000477739 HAO1Q9UJM8 370 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 G3BP2Q9UN86 482 aaKnown RBP10.42□□□□□ -0.74
CMC1-209ENST00000477739 TRAF3IP3Q9Y228 551 aa10.42□□□□□ -0.74
CMC1-209ENST00000477739 C2orf71A6NGG8 1288 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 GAS8O95995 478 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 MSH2P43246 934 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 SPIRE1Q08AE8 756 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 LRRC36Q1X8D7 754 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 NIM1KQ8IY84 436 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 ZBED8Q8IZ13 594 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 SCYL3Q8IZE3 742 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 XXYLT1Q8NBI6 393 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 NETO2Q8NC67 525 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 NT5C1BQ96P26 610 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 POLR3CQ9BUI4 534 aaPredicted RBP10.41□□□□□ -0.74
CMC1-209ENST00000477739 KMT5AQ9NQR1 393 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 R3HDM2Q9Y2K5 976 aaKnown RBP10.41□□□□□ -0.74
CMC1-209ENST00000477739 SYNJ2BP-COX16A0A087WUM0 186 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 SPDYE2BA6NHP3 402 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 SPDYE6P0CI01 402 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 PIK3CAP42336 1068 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 FAXCQ5TGI0 409 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 LONP2Q86WA8 852 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 TMEM130Q8N3G9 435 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 TTLL6Q8N841 843 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 COX16Q9P0S2 106 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 SUCLA2Q9P2R7 463 aaPredicted RBP10.41□□□□□ -0.74
CMC1-209ENST00000477739 AGAP1Q9UPQ3 857 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 DLEC1Q9Y238 1755 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 GRAP2O75791 330 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 SUN1O94901 812 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 CBX6O95503 412 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 MYCNP04198 464 aaPredicted RBP10.41□□□□□ -0.74
CMC1-209ENST00000477739 ECHS1P30084 290 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 BASP1P80723 227 aaKnown RBP10.41□□□□□ -0.74
CMC1-209ENST00000477739 EN1Q05925 392 aaPredicted RBP10.41□□□□□ -0.74
CMC1-209ENST00000477739 GPS1Q13098 491 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 MTMR2Q13614 643 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 P3H1Q32P28 736 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 CYP4A22Q5TCH4 519 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 SCYL2Q6P3W7 929 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 RSBN1LQ6PCB5 846 aaPredicted RBP10.41□□□□□ -0.74
CMC1-209ENST00000477739 ZNF720Q7Z2F6 126 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 ACTRT1Q8TDG2 376 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 NPHS2Q9NP85 383 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 PIH1D1Q9NWS0 290 aaKnown RBP10.41□□□□□ -0.74
CMC1-209ENST00000477739 VAV3Q9UKW4 847 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 TMX2Q9Y320 296 aa10.41□□□□□ -0.74
CMC1-209ENST00000477739 YDJCA8MPS7 323 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 PLS3P13797 630 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 LIG4P49917 911 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 SLC20A2Q08357 652 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 SETDB1Q15047 1291 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 GNPTABQ3T906 1256 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 WDR44Q5JSH3 913 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 ARHGEF16Q5VV41 709 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 IZUMO3Q5VZ72 239 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 TTC17Q96AE7 1141 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 AKT1S1Q96B36 256 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 CALN1Q9BXU9 219 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 SLITRK6Q9H5Y7 841 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 TUFT1Q9NNX1 390 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 SIX2Q9NPC8 291 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 KCNH7Q9NS40 1196 aa10.4□□□□□ -0.74
CMC1-209ENST00000477739 C1orf112Q9NSG2 853 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms