RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 A0A0U1RQJ8 604 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 TARSL2A2RTX5 802 aaKnown RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 TISP43B9A030 160 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 H3BRB1 525 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 TULP1O00294 542 aaPredicted RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 FOXN3O00409 490 aaPredicted RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 DDX3XO00571 662 aaKnown RBP eCLIP8.55□□□□□ -1.042e-31■■■■■ 40.1
VMA21-203ENST00000477649 HRO43593 1189 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 SORBS3O60504 671 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 RTN2O75298 545 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 ERLIN1O75477 346 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 MOCS3O95396 460 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 ALDH1A1P00352 501 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 C4BPAP04003 597 aaKnown RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 SLC10A3P09131 477 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 DLATP10515 647 aaKnown RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 MCF2P10911 925 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 INSRRP14616 1297 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 H2AFXP16104 143 aaPredicted RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 TNNI1P19237 187 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 PROZP22891 400 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 KLRC1P26715 233 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 MARK3P27448 753 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 PDE6CP51160 858 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 SOX10P56693 466 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 YWHAEP62258 255 aaKnown RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 MAP2K1Q02750 393 aaPredicted RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 PRPF4BQ13523 1007 aaKnown RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 TAF1CQ15572 869 aaPredicted RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 ELF2Q15723 593 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 DUOXA2Q1HG44 320 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 ERCC6LQ2NKX8 1250 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 MPZL3Q6UWV2 235 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 CD302Q8IX05 232 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 PPM1KQ8N3J5 372 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 LINC01465Q8N7H1 131 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 OR6J1Q8NGC5 347 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 PLEKHO2Q8TD55 490 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 HELQQ8TDG4 1101 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 AFG1LQ8WV93 481 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 ATRIPQ8WXE1 791 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 RFFLQ8WZ73 363 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 TRIM11Q96F44 468 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 PBKQ96KB5 322 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 TSPAN18Q96SJ8 248 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 TCHPQ9BT92 498 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 SELENOOQ9BVL4 669 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 KATNAL1Q9BW62 490 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 INO80BQ9C086 356 aaPredicted RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 ISCUQ9H1K1 167 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 TUT1Q9H6E5 874 aaKnown RBP8.55□□□□□ -1.04
VMA21-203ENST00000477649 PDGFCQ9NRA1 345 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 LCMT1Q9UIC8 334 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 TELO2Q9Y4R8 837 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 PCDHB2Q9Y5E7 798 aa8.55□□□□□ -1.04
VMA21-203ENST00000477649 NRCAMQ92823 1304 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 CCDC151A5D8V7 595 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 A6NJR5 290 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 B4GALT4O60513 344 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 PHACTR2O75167 634 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 MTA2O94776 668 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 ABL1P00519 1130 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 ATP1A1P05023 1023 aaKnown RBP8.54□□□□□ -1.04
VMA21-203ENST00000477649 CLTAP09496 248 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 SRGAP2CP0DJJ0 459 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 MYBL1P10243 752 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 PIK3CAP42336 1068 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 NOP2P46087 812 aaKnown RBP8.54□□□□□ -1.04
VMA21-203ENST00000477649 CPT1AP50416 773 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 NLRP11P59045 1033 aaKnown RBP8.54□□□□□ -1.04
VMA21-203ENST00000477649 CDR2Q01850 454 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 APBA1Q02410 837 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 PPFIA1Q13136 1202 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 PPP2R5EQ16537 467 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 ARHGAP44Q17R89 818 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 CFAP221Q4G0U5 840 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 GLE1Q53GS7 698 aaKnown RBP8.54□□□□□ -1.04
VMA21-203ENST00000477649 TEX35Q5T0J7 233 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 MEI1Q5TIA1 1274 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 CCDC181Q5TID7 509 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 ATF7IP2Q5U623 682 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 GJB7Q6PEY0 223 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 C17orf99Q6UX52 265 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 CRELD2Q6UXH1 353 aaPredicted RBP8.54□□□□□ -1.04
VMA21-203ENST00000477649 SLFN11Q7Z7L1 901 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 SAPCD2Q86UD0 394 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 RHPN2Q8IUC4 686 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 TTC39CQ8N584 583 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 MSANTD4Q8NCY6 345 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 CAGE1Q8TC20 777 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 TAS1R2Q8TE23 839 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 U2AF1L4Q8WU68 220 aaKnown RBP8.54□□□□□ -1.04
VMA21-203ENST00000477649 HNRNPLLQ8WVV9 542 aaKnown RBP8.54□□□□□ -1.04
VMA21-203ENST00000477649 COPS5Q92905 334 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 OSBPL9Q96SU4 736 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 APBA2Q99767 749 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 C16orf70Q9BSU1 422 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 R3HDMLQ9H3Y0 253 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 ASB7Q9H672 318 aa8.54□□□□□ -1.04
VMA21-203ENST00000477649 PTPRHQ9HD43 1115 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms