RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 IL25Q9H293 177 aa6.2□□□□□ -1.42
VPS45-207ENST00000477558 EPB41L4BQ9H329 900 aa6.2□□□□□ -1.42
VPS45-207ENST00000477558 HELLSQ9NRZ9 838 aa6.2□□□□□ -1.42
VPS45-207ENST00000477558 SERPINB13Q9UIV8 391 aa6.2□□□□□ -1.42
VPS45-207ENST00000477558 PALD1Q9ULE6 856 aa6.2□□□□□ -1.42
VPS45-207ENST00000477558 RAD50Q92878 1312 aa6.2□□□□□ -1.42
VPS45-207ENST00000477558 PLIN4Q96Q06 1357 aa6.2□□□□□ -1.42
VPS45-207ENST00000477558 SGSM2O43147 1006 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 EFCAB14O75071 495 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 HLA-DOAP06340 250 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 COL6A2P12110 1019 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 SDSP20132 328 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 GRK2P25098 689 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 GRK3P35626 688 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 KIF23Q02241 960 aaPredicted RBP6.19□□□□□ -1.42
VPS45-207ENST00000477558 PPATQ06203 517 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 NR1I3Q14994 352 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 TCEA2Q15560 299 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 ALX1Q15699 326 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 FNDC3BQ53EP0 1204 aaKnown RBP6.19□□□□□ -1.42
VPS45-207ENST00000477558 MROH9Q5TGP6 573 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 C12orf60Q5U649 245 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 MIGA2Q7L4E1 593 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 ZNF589Q86UQ0 364 aaPredicted RBP6.19□□□□□ -1.42
VPS45-207ENST00000477558 RIOX2Q8IUF8 465 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 NETO2Q8NC67 525 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 OPTNQ96CV9 577 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 SGPP1Q9BX95 441 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 MCOLN1Q9GZU1 580 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 ZCCHC17Q9NP64 241 aaKnown RBP6.19□□□□□ -1.42
VPS45-207ENST00000477558 SAGE1Q9NXZ1 904 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 ARPP21Q9UBL0 812 aaPredicted RBP6.19□□□□□ -1.42
VPS45-207ENST00000477558 DBR1Q9UK59 544 aaKnown RBP6.19□□□□□ -1.42
VPS45-207ENST00000477558 COA3Q9Y2R0 106 aaPredicted RBP6.19□□□□□ -1.42
VPS45-207ENST00000477558 ADGRA2Q96PE1 1338 aa6.19□□□□□ -1.42
VPS45-207ENST00000477558 A0A0G2JLL6 359 aaPredicted RBP6.18□□□□□ -1.42
VPS45-207ENST00000477558 TCRBV16S1A1N1A0A5B0 115 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 MANSC4A6NHS7 340 aaPredicted RBP6.18□□□□□ -1.42
VPS45-207ENST00000477558 SMIM22K7EJ46 135 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 ARVCFO00192 962 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 CA12O43570 354 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 CYP2D6P10635 497 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 GUCY1A2P33402 732 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 MAPKAPK2P49137 400 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 SRSF3P84103 164 aaKnown RBP6.18□□□□□ -1.42
VPS45-207ENST00000477558 MAP2K1Q02750 393 aaPredicted RBP6.18□□□□□ -1.42
VPS45-207ENST00000477558 MESP2Q0VG99 397 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 PAK1Q13153 545 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 PRKG1Q13976 671 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 SHROOM1Q2M3G4 852 aaPredicted RBP6.18□□□□□ -1.42
VPS45-207ENST00000477558 PLEKHN1Q494U1 663 aaPredicted RBP6.18□□□□□ -1.42
VPS45-207ENST00000477558 MCMDC2Q4G0Z9 681 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 VPS53Q5VIR6 699 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 CTR9Q6PD62 1173 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 TMC6Q7Z403 805 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 PRRT2Q7Z6L0 340 aaPredicted RBP6.18□□□□□ -1.42
VPS45-207ENST00000477558 BRI3BPQ8WY22 251 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 PTPN18Q99952 460 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 ALG1Q9BT22 464 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 SAP30BPQ9UHR5 308 aaKnown RBP6.18□□□□□ -1.42
VPS45-207ENST00000477558 ANAPC4Q9UJX5 808 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 ZBTB21Q9ULJ3 1066 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 AFG3L2Q9Y4W6 797 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 SLC4A4Q9Y6R1 1079 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 CCDC171Q6TFL3 1326 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 MYH4Q9Y623 1939 aa6.18□□□□□ -1.42
VPS45-207ENST00000477558 FAM47E-STBD1D6RA91 191 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 HIP1O00291 1037 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 CXCL11O14625 94 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 NKRFO15226 690 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS45-207ENST00000477558 DGKIO75912 1065 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 DNAJC8O75937 253 aaPredicted RBP6.17□□□□□ -1.42
VPS45-207ENST00000477558 ASNSP08243 561 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 HSPA1AP0DMV8 641 aaKnown RBP6.17□□□□□ -1.42
VPS45-207ENST00000477558 HSPA1BP0DMV9 641 aaKnown RBP6.17□□□□□ -1.42
VPS45-207ENST00000477558 PYGMP11217 842 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 CHMLP26374 656 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 NOVP48745 357 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 INHBEP58166 350 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 SREBF2Q12772 1141 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 ABHD17CQ6PCB6 329 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 ZC3H14Q6PJT7 736 aaKnown RBP6.17□□□□□ -1.42
VPS45-207ENST00000477558 CCDC129Q6ZRS4 1044 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 KIAA0907Q7Z7F0 614 aaPredicted RBP6.17□□□□□ -1.42
VPS45-207ENST00000477558 SKAP1Q86WV1 359 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 RBM12BQ8IXT5 1001 aaKnown RBP6.17□□□□□ -1.42
VPS45-207ENST00000477558 SYNPOQ8N3V7 929 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 SLC44A5Q8NCS7 719 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 PIP4K2CQ8TBX8 421 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 PEX11GQ96HA9 241 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 CCDC136Q96JN2 1154 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 C12orf42Q96LP6 360 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 EPB41L1Q9H4G0 881 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS45-207ENST00000477558 MCM9Q9NXL9 1143 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.17□□□□□ -1.42
VPS45-207ENST00000477558 SWAP70Q9UH65 585 aa6.17□□□□□ -1.42
VPS45-207ENST00000477558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS45-207ENST00000477558 MKI67P46013 3256 aaKnown RBP6.17□□□□□ -1.42
VPS45-207ENST00000477558 CASP8AP2Q9UKL3 1982 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms