RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SYCE2Q6PIF2 218 aa19.34■□□□□ 0.69
PTPN7-209ENST00000477554 MPZL3Q6UWV2 235 aa19.34■□□□□ 0.69
PTPN7-209ENST00000477554 ALKAL1Q6UXT8 129 aa19.34■□□□□ 0.69
PTPN7-209ENST00000477554 C12orf76Q8N812 135 aaPredicted RBP19.34■□□□□ 0.69
PTPN7-209ENST00000477554 HPS3Q969F9 1004 aa19.34■□□□□ 0.69
PTPN7-209ENST00000477554 PPP1R10Q96QC0 940 aaKnown RBP19.34■□□□□ 0.69
PTPN7-209ENST00000477554 CCDC39Q9UFE4 941 aa19.34■□□□□ 0.69
PTPN7-209ENST00000477554 CD207Q9UJ71 328 aa19.34■□□□□ 0.69
PTPN7-209ENST00000477554 TBX20Q9UMR3 447 aa19.34■□□□□ 0.69
PTPN7-209ENST00000477554 HCFC2Q9Y5Z7 792 aa19.34■□□□□ 0.69
PTPN7-209ENST00000477554 PDCD11Q14690 1871 aaKnown RBP19.33■□□□□ 0.68
PTPN7-209ENST00000477554 CITO14578 2027 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 ANKRD63C9JTQ0 380 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 TRAK2O60296 914 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 WEE2P0C1S8 567 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 STAT6P42226 847 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 FAM178BQ8IXR5 827 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 HACE1Q8IYU2 909 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 TMEM87AQ8NBN3 555 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 SMRP1Q8NCR6 262 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 C3orf58Q8NDZ4 430 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 GLIS3Q8NEA6 775 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 RSPH1Q8WYR4 309 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 C18orf25Q96B23 403 aaPredicted RBP19.33■□□□□ 0.68
PTPN7-209ENST00000477554 LARSQ9P2J5 1176 aaKnown RBP19.33■□□□□ 0.68
PTPN7-209ENST00000477554 STK17AQ9UEE5 414 aa19.33■□□□□ 0.68
PTPN7-209ENST00000477554 TRIOO75962 3097 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 SMIM28A0A1B0GU29 152 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 FAM189A1O60320 539 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 SOD2P04179 222 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 THP07101 528 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 CNPP09543 421 aaKnown RBP19.32■□□□□ 0.68
PTPN7-209ENST00000477554 RPL17P18621 184 aaKnown RBP19.32■□□□□ 0.68
PTPN7-209ENST00000477554 SMTNP53814 917 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 STRN3Q13033 797 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 TUSC3Q13454 348 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 PDE12Q6L8Q7 609 aaKnown RBP19.32■□□□□ 0.68
PTPN7-209ENST00000477554 ZSWIM2Q8NEG5 633 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 SNX27Q96L92 541 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 TCHPQ9BT92 498 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 HERC2P3Q9BVR0 1158 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 S1PR5Q9H228 398 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 GDPD2Q9HCC8 539 aa19.32■□□□□ 0.68
PTPN7-209ENST00000477554 NCOR1O75376 2440 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 TNFRSF10AO00220 468 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 NCK2O43639 380 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 TBCAO75347 108 aaKnown RBP19.31■□□□□ 0.68
PTPN7-209ENST00000477554 TOM1L1O75674 476 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 MCF2P10911 925 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 CLCNKBP51801 687 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 COASYQ13057 564 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 HSP90AA2PQ14568 343 aaPredicted RBP19.31■□□□□ 0.68
PTPN7-209ENST00000477554 NOLC1Q14978 699 aaKnown RBP eCLIP19.31■□□□□ 0.68
PTPN7-209ENST00000477554 SLC10A6Q3KNW5 377 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 XKR4Q5GH76 650 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 KIAA0319Q5VV43 1072 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 ANKRD54Q6NXT1 300 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 FUT10Q6P4F1 479 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 SV2BQ7L1I2 683 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 SLC22A17Q8WUG5 538 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 PPP2R3CQ969Q6 453 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 DHX58Q96C10 678 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 KLHL5Q96PQ7 755 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 ADAM28Q9UKQ2 775 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 USP15Q9Y4E8 981 aaPredicted RBP19.31■□□□□ 0.68
PTPN7-209ENST00000477554 ZMYM2Q9UBW7 1377 aa19.31■□□□□ 0.68
PTPN7-209ENST00000477554 I3L4J1 428 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 CUTAO60888 179 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 CXCL8P10145 99 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 PTMSP20962 102 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 MCM4P33991 863 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 TXLNAP40222 546 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 ME1P48163 572 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 GTF2BQ00403 316 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 MCL1Q07820 350 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 SMAD4Q13485 552 aaKnown RBP19.3■□□□□ 0.68
PTPN7-209ENST00000477554 SMAD2Q15796 467 aaKnown RBP19.3■□□□□ 0.68
PTPN7-209ENST00000477554 RTP2Q5QGT7 225 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 PRSS55Q6UWB4 352 aaPredicted RBP19.3■□□□□ 0.68
PTPN7-209ENST00000477554 TMEM184AQ6ZMB5 413 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 CCDC73Q6ZRK6 1079 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 GLYCTKQ8IVS8 523 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 GRAMD1CQ8IYS0 662 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 BICD1Q96G01 975 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 CDCA3Q99618 268 aaPredicted RBP19.3■□□□□ 0.68
PTPN7-209ENST00000477554 STRA6Q9BX79 667 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 IRAK3Q9Y616 596 aa19.3■□□□□ 0.68
PTPN7-209ENST00000477554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.29■□□□□ 0.68
PTPN7-209ENST00000477554 PPP1R37O75864 691 aa19.29■□□□□ 0.68
PTPN7-209ENST00000477554 GUCY2FP51841 1108 aa19.29■□□□□ 0.68
PTPN7-209ENST00000477554 ZP2Q05996 745 aa19.29■□□□□ 0.68
PTPN7-209ENST00000477554 TPRNQ4KMQ1 711 aa19.29■□□□□ 0.68
PTPN7-209ENST00000477554 ZPBP2Q6X784 338 aa19.29■□□□□ 0.68
PTPN7-209ENST00000477554 ZNF720Q7Z2F6 126 aa19.29■□□□□ 0.68
PTPN7-209ENST00000477554 COLEC11Q9BWP8 271 aa19.29■□□□□ 0.68
PTPN7-209ENST00000477554 CHST7Q9NS84 486 aa19.29■□□□□ 0.68
PTPN7-209ENST00000477554 TUBGCP4Q9UGJ1 667 aa19.29■□□□□ 0.68
PTPN7-209ENST00000477554 ANK1P16157 1881 aa19.29■□□□□ 0.68
PTPN7-209ENST00000477554 FRMD3A2A2Y4 597 aa19.28■□□□□ 0.68
PTPN7-209ENST00000477554 GOLGA6L4A6NEF3 574 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms