RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 PNMA5Q96PV4 448 aa17.25■□□□□ 0.35
CLDN11-204ENST00000477531 PAAF1Q9BRP4 392 aa17.25■□□□□ 0.35
CLDN11-204ENST00000477531 TTPALQ9BTX7 342 aa17.25■□□□□ 0.35
CLDN11-204ENST00000477531 LIMD1Q9UGP4 676 aa17.25■□□□□ 0.35
CLDN11-204ENST00000477531 TECTAO75443 2155 aa17.25■□□□□ 0.35
CLDN11-204ENST00000477531 VPS37CA5D8V6 355 aaPredicted RBP17.24■□□□□ 0.35
CLDN11-204ENST00000477531 H0YCG3 227 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 SLC16A4O15374 487 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 KIF4AO95239 1232 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 PLS3P13797 630 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 GRM5P41594 1212 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 RAD51AP2Q09MP3 1159 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 GLYCTKQ8IVS8 523 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 SPIRE2Q8WWL2 714 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 ACAP3Q96P50 834 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 NTPCRQ9BSD7 190 aaKnown RBP17.24■□□□□ 0.35
CLDN11-204ENST00000477531 TARS2Q9BW92 718 aaKnown RBP17.24■□□□□ 0.35
CLDN11-204ENST00000477531 CDT1Q9H211 546 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 PIDD1Q9HB75 910 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 SLC38A7Q9NVC3 462 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 CACNG4Q9UBN1 327 aa17.24■□□□□ 0.35
CLDN11-204ENST00000477531 TRAPPC3O43617 180 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 B3GAT3O94766 335 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 SPATA31D3P0C874 917 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 MYBP10242 640 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 MCF2P10911 925 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 SLC12A3P55017 1021 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 OSTNP61366 133 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 MAPK7Q13164 816 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 PSMD5Q16401 504 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 GLRA4Q5JXX5 417 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 DCLRE1AQ6PJP8 1040 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 MPZL3Q6UWV2 235 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 SPATA31D4Q6ZUB0 917 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 RHOBTB2Q9BYZ6 727 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 ZDHHC7Q9NXF8 308 aa17.23■□□□□ 0.35
CLDN11-204ENST00000477531 LARSQ9P2J5 1176 aaKnown RBP17.23■□□□□ 0.35
CLDN11-204ENST00000477531 TGM5O43548 720 aa17.22■□□□□ 0.35
CLDN11-204ENST00000477531 HARSP12081 509 aaKnown RBP17.22■□□□□ 0.35
CLDN11-204ENST00000477531 RPL17P18621 184 aaKnown RBP17.22■□□□□ 0.35
CLDN11-204ENST00000477531 LONP1P36776 959 aaKnown RBP17.22■□□□□ 0.35
CLDN11-204ENST00000477531 MATR3P43243 847 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLDN11-204ENST00000477531 CUL4AQ13619 759 aa17.22■□□□□ 0.35
CLDN11-204ENST00000477531 NAB2Q15742 525 aa17.22■□□□□ 0.35
CLDN11-204ENST00000477531 TMEM119Q4V9L6 283 aa17.22■□□□□ 0.35
CLDN11-204ENST00000477531 RTP2Q5QGT7 225 aa17.22■□□□□ 0.35
CLDN11-204ENST00000477531 PRSS55Q6UWB4 352 aaPredicted RBP17.22■□□□□ 0.35
CLDN11-204ENST00000477531 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.22■□□□□ 0.35
CLDN11-204ENST00000477531 TAS1R3Q7RTX0 852 aa17.22■□□□□ 0.35
CLDN11-204ENST00000477531 FBXL6Q8N531 539 aa17.22■□□□□ 0.35
CLDN11-204ENST00000477531 PIK3R5Q8WYR1 880 aa17.22■□□□□ 0.35
CLDN11-204ENST00000477531 SMG7Q92540 1137 aaKnown RBP17.22■□□□□ 0.35
CLDN11-204ENST00000477531 BICD1Q96G01 975 aa17.22■□□□□ 0.35
CLDN11-204ENST00000477531 DDX27Q96GQ7 796 aaKnown RBP17.22■□□□□ 0.35
CLDN11-204ENST00000477531 PPP1R10Q96QC0 940 aaKnown RBP17.22■□□□□ 0.35
CLDN11-204ENST00000477531 CXCL16Q9H2A7 254 aa17.22■□□□□ 0.35
CLDN11-204ENST00000477531 PTPRHQ9HD43 1115 aa17.22■□□□□ 0.35
CLDN11-204ENST00000477531 SMIM28A0A1B0GU29 152 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 TMEM189-UBE2V1I3L0A0 370 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 TOM1L1O75674 476 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 RFPL2O75678 378 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 KRT18P05783 430 aaKnown RBP17.21■□□□□ 0.35
CLDN11-204ENST00000477531 ASGR2P07307 311 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 DHX8Q14562 1220 aaKnown RBP17.21■□□□□ 0.35
CLDN11-204ENST00000477531 SF3A1Q15459 793 aaKnown RBP17.21■□□□□ 0.35
CLDN11-204ENST00000477531 LIN9Q5TKA1 542 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 CEP120Q8N960 986 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 TMEM161BQ8NDZ6 487 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 PRRX2Q99811 253 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 WDR6Q9NNW5 1121 aaKnown RBP17.21■□□□□ 0.35
CLDN11-204ENST00000477531 ANKFY1Q9P2R3 1169 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 ODF2LQ9ULJ1 636 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 MUC6Q6W4X9 2439 aa17.21■□□□□ 0.35
CLDN11-204ENST00000477531 MYO10Q9HD67 2058 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 CLDN3O15551 220 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 FAM13AO94988 1023 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 BRD1O95696 1058 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 MAPTP10636 758 aaKnown RBP17.2■□□□□ 0.34
CLDN11-204ENST00000477531 SCP2P22307 547 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 PROZP22891 400 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 GBP2P32456 591 aaPredicted RBP17.2■□□□□ 0.34
CLDN11-204ENST00000477531 CLCNKBP51801 687 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 NOLC1Q14978 699 aaKnown RBP eCLIP17.2■□□□□ 0.34
CLDN11-204ENST00000477531 UPP1Q16831 310 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 LILRA6Q6PI73 481 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 ZPBP2Q6X784 338 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 GPBP1Q86WP2 473 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 LNX1Q8TBB1 728 aaPredicted RBP17.2■□□□□ 0.34
CLDN11-204ENST00000477531 ASIC4Q96FT7 647 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 PRKD2Q9BZL6 878 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 CLUHO75153 1309 aa17.2■□□□□ 0.34
CLDN11-204ENST00000477531 NPHP3-ACAD11A0A0J9YXS1 232 aa17.19■□□□□ 0.34
CLDN11-204ENST00000477531 KCNE1P15382 129 aa17.19■□□□□ 0.34
CLDN11-204ENST00000477531 XKR4Q5GH76 650 aa17.19■□□□□ 0.34
CLDN11-204ENST00000477531 ALKAL1Q6UXT8 129 aa17.19■□□□□ 0.34
CLDN11-204ENST00000477531 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
CLDN11-204ENST00000477531 ZBTB45Q96K62 511 aaPredicted RBP17.19■□□□□ 0.34
CLDN11-204ENST00000477531 SNX27Q96L92 541 aa17.19■□□□□ 0.34
CLDN11-204ENST00000477531 CLSTN3Q9BQT9 956 aa17.19■□□□□ 0.34
CLDN11-204ENST00000477531 PARVGQ9HBI0 331 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms