RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 PSEN2P49810 448 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 GPC3P51654 580 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 APLP1P51693 650 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 PURAQ00577 322 aaKnown RBP12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 PPP2R3AQ06190 1150 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 ATF7IP2Q5U623 682 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 KIF18AQ8NI77 898 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 MRPL4Q9BYD3 311 aaKnown RBP12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 CDT1Q9H211 546 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 APOBEC3GQ9HC16 384 aaKnown RBP12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 PTPRHQ9HD43 1115 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 TAS2R14Q9NYV8 317 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 AIPL1Q9NZN9 384 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 HES2Q9Y543 173 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 GTPBP10A4D1E9 387 aaKnown RBP12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 ZBTB8OSQ8IWT0 167 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 EXOC8Q8IYI6 725 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 MSL3Q8N5Y2 521 aaKnown RBP12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 LNX1Q8TBB1 728 aaPredicted RBP12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 TMEM174Q8WUU8 243 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 PCDHA13Q9Y5I0 950 aa12.79□□□□□ -0.36
TNRC6A-206ENST00000477487 EIF3CLB5ME19 914 aaKnown RBP12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 ACKR2O00590 384 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 TOM1L1O75674 476 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 CYP2C9P11712 490 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 ARHGAP29Q52LW3 1261 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 CCDC122Q5T0U0 273 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 KIAA1328Q86T90 577 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 HELQQ8TDG4 1101 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 JAKMIP2Q96AA8 810 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 EIF3CQ99613 913 aaKnown RBP12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 MTMR12Q9C0I1 747 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 AP5M1Q9H0R1 490 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 GOLPH3Q9H4A6 298 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 KIAA1522Q9P206 1035 aaPredicted RBP12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 CGNQ9P2M7 1197 aaKnown RBP12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 KIF2AO00139 706 aaPredicted RBP12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 DDX3XO00571 662 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 BUB1O43683 1085 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 C4BPAP04003 597 aaKnown RBP12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 SERPING1P05155 500 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 AKR1A1P14550 325 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 PROZP22891 400 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 PSMD6Q15008 389 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 TAF3Q5VWG9 929 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 KRT39Q6A163 491 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 GLYCTKQ8IVS8 523 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 IFIH1Q9BYX4 1025 aaKnown RBP12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 ADAMTS10Q9H324 1103 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 PDZD7Q9H5P4 517 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 TMEM8AQ9HCN3 771 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 CAPN6Q9Y6Q1 641 aa12.78□□□□□ -0.36
TNRC6A-206ENST00000477487 HAS3O00219 553 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 CCP110O43303 1012 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 GPR32O75388 356 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 MOCS3O95396 460 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 SGPL1O95470 568 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 HLA-DRAP01903 254 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 ADAM17P78536 824 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 BIRC3Q13489 604 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 SLC9C1Q4G0N8 1177 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 C15orf39Q6ZRI6 1047 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 ZNF662Q6ZS27 426 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 RAB20Q9NX57 234 aa12.77□□□□□ -0.36
TNRC6A-206ENST00000477487 CYP26A1O43174 497 aa12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 CTIFO43310 598 aaKnown RBP12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 TSPAN1O60635 241 aa12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 URI1O94763 535 aaPredicted RBP12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 CYLC1P35663 651 aaPredicted RBP12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 SOX5P35711 763 aa12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 EFNA5P52803 228 aa12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 CDK17Q00537 523 aa12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 KCTD19Q17RG1 926 aaPredicted RBP12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 TSHZ1Q6ZSZ6 1077 aa12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 SLC47A2Q86VL8 602 aa12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 TMC2Q8TDI7 906 aa12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 FNBP1Q96RU3 617 aa12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 EIF2AQ9BY44 585 aaKnown RBP12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 CPSF3Q9UKF6 684 aaKnown RBP12.77□□□□□ -0.37
TNRC6A-206ENST00000477487 H0YCG3 227 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 CFHP08603 1231 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 SNRPFP62306 86 aaKnown RBP12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 MCL1Q07820 350 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 NBPF20Q3BBV1 942 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 MPZL3Q6UWV2 235 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 ZPBP2Q6X784 338 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 EGFL6Q8IUX8 553 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 FBXL13Q8NEE6 735 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 STK33Q9BYT3 514 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 EDEM3Q9BZQ6 932 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 GRIN2DO15399 1336 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 MAPK13O15264 365 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 MAGEB2O15479 319 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 GAS2O43903 313 aaKnown RBP12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
TNRC6A-206ENST00000477487 NFICP08651 508 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms