RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 TTC26A0AVF1 554 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 EPOPA6NHQ4 379 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 NT5C1B-RDH14C9J2C7 533 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 F8W810 466 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 RFXAPO00287 272 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 INPPL1O15357 1258 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 NR3C1P04150 777 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 GUCY2FP51841 1108 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 SOX4Q06945 474 aaPredicted RBP17.29■□□□□ 0.36
COPS3-207ENST00000477299 KLHL40Q2TBA0 621 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 DPCR1Q3MIW9 517 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 COBLL1Q53SF7 1204 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 XKR4Q5GH76 650 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 CENPPQ6IPU0 288 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 ABI1Q8IZP0 508 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 PLEKHO2Q8TD55 490 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 C18orf25Q96B23 403 aaPredicted RBP17.29■□□□□ 0.36
COPS3-207ENST00000477299 TIFAQ96CG3 184 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 PAAF1Q9BRP4 392 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 TTYH1Q9H313 450 aaPredicted RBP17.29■□□□□ 0.36
COPS3-207ENST00000477299 GOLGA2P5Q9HBQ8 144 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 TRAF3IP3Q9Y228 551 aa17.29■□□□□ 0.36
COPS3-207ENST00000477299 SCN1AP35498 2009 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 HOXA2O43364 376 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 EXTL3O43909 919 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 NLRP12P59046 1061 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 RAB30Q15771 203 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 HS2ST1Q7LGA3 356 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 APBB1IPQ7Z5R6 666 aaPredicted RBP17.28■□□□□ 0.36
COPS3-207ENST00000477299 HACE1Q8IYU2 909 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 GPD1LQ8N335 351 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 TRIML1Q8N9V2 468 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 NELFBQ8WX92 580 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 P2RX5Q93086 422 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 FBXL18Q96ME1 805 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 PPP1R10Q96QC0 940 aaKnown RBP17.28■□□□□ 0.36
COPS3-207ENST00000477299 DUSP9Q99956 384 aaKnown RBP17.28■□□□□ 0.36
COPS3-207ENST00000477299 GZF1Q9H116 711 aaPredicted RBP17.28■□□□□ 0.36
COPS3-207ENST00000477299 RPF1Q9H9Y2 349 aaKnown RBP17.28■□□□□ 0.36
COPS3-207ENST00000477299 PDE11AQ9HCR9 933 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 UBN1Q9NPG3 1134 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 CTNND2Q9UQB3 1225 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 MYO7AQ13402 2215 aa17.28■□□□□ 0.36
COPS3-207ENST00000477299 CCNE1P24864 410 aa17.27■□□□□ 0.36
COPS3-207ENST00000477299 YARSP54577 528 aaKnown RBP17.27■□□□□ 0.36
COPS3-207ENST00000477299 PPP2R2DQ66LE6 453 aa17.27■□□□□ 0.36
COPS3-207ENST00000477299 LMBRD2Q68DH5 695 aaPredicted RBP17.27■□□□□ 0.36
COPS3-207ENST00000477299 JADE1Q6IE81 842 aa17.27■□□□□ 0.36
COPS3-207ENST00000477299 Q7L0L9 218 aa17.27■□□□□ 0.36
COPS3-207ENST00000477299 TMEM173Q86WV6 379 aaPredicted RBP17.27■□□□□ 0.36
COPS3-207ENST00000477299 C12orf56Q8IXR9 622 aa17.27■□□□□ 0.36
COPS3-207ENST00000477299 COLGALT2Q8IYK4 626 aa17.27■□□□□ 0.36
COPS3-207ENST00000477299 XXYLT1Q8NBI6 393 aa17.27■□□□□ 0.36
COPS3-207ENST00000477299 BCL7CQ8WUZ0 217 aaPredicted RBP17.27■□□□□ 0.36
COPS3-207ENST00000477299 FAM161BQ96MY7 647 aa17.27■□□□□ 0.36
COPS3-207ENST00000477299 SLC28A3Q9HAS3 691 aa17.27■□□□□ 0.36
COPS3-207ENST00000477299 RNF216Q9NWF9 866 aaPredicted RBP17.27■□□□□ 0.36
COPS3-207ENST00000477299 COL4A4P53420 1690 aaPredicted RBP17.26■□□□□ 0.35
COPS3-207ENST00000477299 PTPRJQ12913 1337 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 CASTOR2A6NHX0 329 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 CALUO43852 315 aaPredicted RBP17.26■□□□□ 0.35
COPS3-207ENST00000477299 ZC3H11AO75152 810 aaKnown RBP eCLIP17.26■□□□□ 0.35
COPS3-207ENST00000477299 NFICP08651 508 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 NR2F2P24468 414 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 SLC11A1P49279 550 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 FXR1P51114 621 aaKnown RBP eCLIP17.26■□□□□ 0.35
COPS3-207ENST00000477299 BCAR1P56945 870 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 RNASELQ05823 741 aaKnown RBP17.26■□□□□ 0.35
COPS3-207ENST00000477299 DSC1Q08554 894 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 SPOUT1Q5T280 376 aaKnown RBP17.26■□□□□ 0.35
COPS3-207ENST00000477299 TTI2Q6NXR4 508 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 BRSK2Q8IWQ3 736 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 EFCAB13Q8IY85 973 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 LRRC43Q8N309 656 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 COLGALT1Q8NBJ5 622 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 URGCPQ8TCY9 931 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 CLP1Q92989 425 aaKnown RBP17.26■□□□□ 0.35
COPS3-207ENST00000477299 DHTKD1Q96HY7 919 aaPredicted RBP17.26■□□□□ 0.35
COPS3-207ENST00000477299 RPS6KC1Q96S38 1066 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 POP1Q99575 1024 aaKnown RBP17.26■□□□□ 0.35
COPS3-207ENST00000477299 CNTN3Q9P232 1028 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 TUBGCP4Q9UGJ1 667 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 CHD7Q9P2D1 2997 aa17.26■□□□□ 0.35
COPS3-207ENST00000477299 SZT2Q5T011 3432 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 EXOC3O60645 756 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 AKAP3O75969 853 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 KIF20AO95235 890 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 LDHAP00338 332 aaKnown RBP17.25■□□□□ 0.35
COPS3-207ENST00000477299 THP07101 528 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 GALTP07902 379 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 KCNE1P15382 129 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 BMPR1AP36894 532 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 ERVK-21P61565 698 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 SNRPFP62306 86 aaKnown RBP17.25■□□□□ 0.35
COPS3-207ENST00000477299 ADAM9Q13443 819 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 ZBTB6Q15916 424 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 SNRNP35Q16560 246 aaKnown RBP17.25■□□□□ 0.35
COPS3-207ENST00000477299 EPC2Q52LR7 807 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 CEP135Q66GS9 1140 aa17.25■□□□□ 0.35
COPS3-207ENST00000477299 KCNT2Q6UVM3 1135 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms