RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 KIF4AO95239 1232 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 BRD1O95696 1058 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 BMP15O95972 392 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 SPATA31D3P0C874 917 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 MCF2P10911 925 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 PROZP22891 400 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 IGFBP6P24592 240 aaPredicted RBP11.85□□□□□ -0.51
SEC13-214ENST00000476597 UBA7P41226 1012 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 GRM5P41594 1212 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 CREMQ03060 361 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 RAD51AP2Q09MP3 1159 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 ELAVL2Q12926 359 aaKnown RBP11.85□□□□□ -0.51
SEC13-214ENST00000476597 ARSHQ5FYA8 562 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 ELMSAN1Q6PJG2 1045 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 PRSS55Q6UWB4 352 aaPredicted RBP11.85□□□□□ -0.51
SEC13-214ENST00000476597 CD300LGQ6UXG3 332 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 SPATA31D4Q6ZUB0 917 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 CEP120Q8N960 986 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 KREMEN2Q8NCW0 462 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 TMEM161BQ8NDZ6 487 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 LNX1Q8TBB1 728 aaPredicted RBP11.85□□□□□ -0.51
SEC13-214ENST00000476597 HASPINQ8TF76 798 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 CDK5RAP3Q96JB5 506 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 TCHPQ9BT92 498 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 TTPALQ9BTX7 342 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 CCDC94Q9BW85 323 aaPredicted RBP11.85□□□□□ -0.51
SEC13-214ENST00000476597 BACH2Q9BYV9 841 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 KCNH6Q9H252 994 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 LIMD1Q9UGP4 676 aa11.85□□□□□ -0.51
SEC13-214ENST00000476597 TMEM189-UBE2V1I3L0A0 370 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 MYBP10242 640 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 MAPTP10636 758 aaKnown RBP11.84□□□□□ -0.51
SEC13-214ENST00000476597 RPL17P18621 184 aaKnown RBP11.84□□□□□ -0.51
SEC13-214ENST00000476597 PDCP20941 246 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 LONP1P36776 959 aaKnown RBP11.84□□□□□ -0.51
SEC13-214ENST00000476597 CLCNKBP51801 687 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 SMTNP53814 917 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 YARSP54577 528 aaKnown RBP11.84□□□□□ -0.51
SEC13-214ENST00000476597 SF3A1Q15459 793 aaKnown RBP11.84□□□□□ -0.51
SEC13-214ENST00000476597 ZNF568Q3ZCX4 644 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 GLRA4Q5JXX5 417 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 FAM171A1Q5VUB5 890 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 CCDC149Q6ZUS6 474 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 OTOP3Q7RTS5 596 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 ZBTB33Q86T24 672 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 UBALD2Q8IYN6 164 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 TDRD5Q8NAT2 981 aaKnown RBP11.84□□□□□ -0.51
SEC13-214ENST00000476597 PIK3R5Q8WYR1 880 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 KCNN1Q92952 543 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 ZNF707Q96C28 371 aaPredicted RBP11.84□□□□□ -0.51
SEC13-214ENST00000476597 ACSF2Q96CM8 615 aaPredicted RBP11.84□□□□□ -0.51
SEC13-214ENST00000476597 CALML4Q96GE6 196 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 ZBTB45Q96K62 511 aaPredicted RBP11.84□□□□□ -0.51
SEC13-214ENST00000476597 UROC1Q96N76 676 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 CLSTN3Q9BQT9 956 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 WDR6Q9NNW5 1121 aaKnown RBP11.84□□□□□ -0.51
SEC13-214ENST00000476597 TOPORSQ9NS56 1045 aaPredicted RBP11.84□□□□□ -0.51
SEC13-214ENST00000476597 SORCS3Q9UPU3 1222 aa11.84□□□□□ -0.51
SEC13-214ENST00000476597 ZDBF2Q9HCK1 2354 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 NPHP3-ACAD11A0A0J9YXS1 232 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 TOM1L1O75674 476 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 RFPL2O75678 378 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 B3GAT3O94766 335 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 FGFR3P22607 806 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 OSTNP61366 133 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
SEC13-214ENST00000476597 GRIN1Q05586 938 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 STRN3Q13033 797 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 MTMR3Q13615 1198 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 UPP1Q16831 310 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 PDXDC1Q6P996 788 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 MPZL3Q6UWV2 235 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 CEP57Q86XR8 500 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 GLYCTKQ8IVS8 523 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 FBXL6Q8N531 539 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 LRRC15Q8TF66 581 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 ZMAT2Q96NC0 199 aaKnown RBP11.83□□□□□ -0.52
SEC13-214ENST00000476597 ACAP3Q96P50 834 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 BLOC1S4Q9NUP1 217 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 ZDHHC7Q9NXF8 308 aa11.83□□□□□ -0.52
SEC13-214ENST00000476597 LARSQ9P2J5 1176 aaKnown RBP11.83□□□□□ -0.52
SEC13-214ENST00000476597 VPS37CA5D8V6 355 aaPredicted RBP11.82□□□□□ -0.52
SEC13-214ENST00000476597 MEFVO15553 781 aaPredicted RBP11.82□□□□□ -0.52
SEC13-214ENST00000476597 ZMYND10O75800 440 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 ASGR2P07307 311 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 KCNE1P15382 129 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 SYT1P21579 422 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 NCKAP1LP55160 1127 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 SOX4Q06945 474 aaPredicted RBP11.82□□□□□ -0.52
SEC13-214ENST00000476597 PTPAQ15257 358 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 PSMD5Q16401 504 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 ZPBP2Q6X784 338 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.82□□□□□ -0.52
SEC13-214ENST00000476597 SMG7Q92540 1137 aaKnown RBP11.82□□□□□ -0.52
SEC13-214ENST00000476597 DDX27Q96GQ7 796 aaKnown RBP11.82□□□□□ -0.52
SEC13-214ENST00000476597 INTS4Q96HW7 963 aaKnown RBP11.82□□□□□ -0.52
SEC13-214ENST00000476597 SNX27Q96L92 541 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 PRKD2Q9BZL6 878 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 GOLGA2P5Q9HBQ8 144 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 SLC38A7Q9NVC3 462 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms