RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 ATG7O95352 703 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 WISP1O95388 367 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 VTNP04004 478 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 POU2F2P09086 479 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 HNRNPA1P09651 372 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLDN4-205ENST00000476494 POLR2MP0CAP2 368 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 ZSCAN20P17040 1043 aaPredicted RBP7.25□□□□□ -1.25
CLDN4-205ENST00000476494 ITGB5P18084 799 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 EIF4BP23588 611 aaKnown RBP7.25□□□□□ -1.25
CLDN4-205ENST00000476494 GJB2P29033 226 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 HOXA9P31269 272 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 PHKA2P46019 1235 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 CCT2P78371 535 aaKnown RBP7.25□□□□□ -1.25
CLDN4-205ENST00000476494 CREB5Q02930 508 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 CFHR1Q03591 330 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 CCINQ13939 588 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 ZNF423Q2M1K9 1284 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 COLEC12Q5KU26 742 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 PDXDC1Q6P996 788 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 ELMSAN1Q6PJG2 1045 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 GPR65Q8IYL9 337 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 TRIM22Q8IYM9 498 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 FAM177A1Q8N128 213 aaPredicted RBP7.25□□□□□ -1.25
CLDN4-205ENST00000476494 LINC01465Q8N7H1 131 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 PNMA1Q8ND90 353 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 NSUN7Q8NE18 718 aaKnown RBP7.25□□□□□ -1.25
CLDN4-205ENST00000476494 FZD8Q9H461 694 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 VAT1LQ9HCJ6 419 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 FOXD4L1Q9NU39 408 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 HCFC1R1Q9NWW0 138 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 GDE1Q9NZC3 331 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 FNIP2Q9P278 1114 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 DNMT3BQ9UBC3 853 aaKnown RBP7.25□□□□□ -1.25
CLDN4-205ENST00000476494 FBXW11Q9UKB1 542 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 KCNH3Q9ULD8 1083 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 SSX2IPQ9Y2D8 614 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 PIAS3Q9Y6X2 628 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 ADAMTS9Q9P2N4 1935 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 NCANO14594 1321 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 STK36Q9NRP7 1315 aa7.25□□□□□ -1.25
CLDN4-205ENST00000476494 TSC2P49815 1807 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 TNRC6BQ9UPQ9 1833 aaKnown RBP7.24□□□□□ -1.25
CLDN4-205ENST00000476494 F8W810 466 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 KHNYNO15037 678 aaKnown RBP7.24□□□□□ -1.25
CLDN4-205ENST00000476494 DCLK1O15075 740 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 STX6O43752 255 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 ZNF623O75123 536 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 C22orf31O95567 290 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 ALDH2P05091 517 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 URODP06132 367 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 ATP4AP20648 1035 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 SYT1P21579 422 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 ADD1P35611 737 aaKnown RBP7.24□□□□□ -1.25
CLDN4-205ENST00000476494 GLUD2P49448 558 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 AKAP17AQ02040 695 aaKnown RBP7.24□□□□□ -1.25
CLDN4-205ENST00000476494 SSRP1Q08945 709 aaKnown RBP7.24□□□□□ -1.25
CLDN4-205ENST00000476494 ST3GAL1Q11201 340 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 GRM2Q14416 872 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 GRM4Q14833 912 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 SLC5A9Q2M3M2 681 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 UAP1L1Q3KQV9 507 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 TXNDC11Q6PKC3 985 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 CLEC17AQ6ZS10 378 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 MICU3Q86XE3 530 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 STAG2Q8N3U4 1231 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 ZNF513Q8N8E2 541 aaPredicted RBP7.24□□□□□ -1.25
CLDN4-205ENST00000476494 GPRASP2Q96D09 838 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 MCRS1Q96EZ8 462 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 GBP4Q96PP9 640 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 TMEM175Q9BSA9 504 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 RNF26Q9BY78 433 aaPredicted RBP7.24□□□□□ -1.25
CLDN4-205ENST00000476494 SLC32A1Q9H598 525 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 BRD9Q9H8M2 597 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 SENP2Q9HC62 589 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 KCNK4Q9NYG8 393 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 FAN1Q9Y2M0 1017 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 PTPRDP23468 1912 aa7.24□□□□□ -1.25
CLDN4-205ENST00000476494 FBN2P35556 2912 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 PALM3A6NDB9 673 aaPredicted RBP7.23□□□□□ -1.25
CLDN4-205ENST00000476494 H3BQV1 296 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 ZBTB5O15062 677 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 PRPF3O43395 683 aaKnown RBP7.23□□□□□ -1.25
CLDN4-205ENST00000476494 ZNF862O60290 1169 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 HBP1O60381 514 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 DEXIO95424 95 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 CTDNEP1O95476 244 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 PARP1P09874 1014 aaKnown RBP7.23□□□□□ -1.25
CLDN4-205ENST00000476494 CCDC192P0DO97 292 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 ZSCAN22P10073 491 aaPredicted RBP7.23□□□□□ -1.25
CLDN4-205ENST00000476494 XBP1P17861 261 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 RPL17P18621 184 aaKnown RBP7.23□□□□□ -1.25
CLDN4-205ENST00000476494 PTMSP20962 102 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 FGFR4P22455 802 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 ITPKBP27987 946 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 STAT5BP51692 787 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 NLRP11P59045 1033 aaKnown RBP7.23□□□□□ -1.25
CLDN4-205ENST00000476494 CAMK2BQ13554 666 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 TRIM29Q14134 588 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 NTRK3Q16288 839 aa7.23□□□□□ -1.25
CLDN4-205ENST00000476494 LONRF3Q496Y0 759 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms