RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 DAAM2Q86T65 1068 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 SLFN12Q8IYM2 578 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 PRELID2Q8N945 189 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 FBXO25Q8TCJ0 367 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 U2AF1L4Q8WU68 220 aaKnown RBP8.97□□□□□ -0.97
VAPB-205ENST00000476395 RPGRQ92834 1020 aaKnown RBP8.97□□□□□ -0.97
VAPB-205ENST00000476395 C18orf8Q96DM3 657 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 PCDHB18PQ96TA0 734 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 FMO2Q99518 471 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 NYAP2Q9P242 653 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 CHORDC1Q9UHD1 332 aaPredicted RBP8.97□□□□□ -0.97
VAPB-205ENST00000476395 ARID2Q68CP9 1835 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 CCDC188H7C350 402 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 NUDT17P0C025 328 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 HMGB2P26583 209 aaKnown RBP8.97□□□□□ -0.97
VAPB-205ENST00000476395 MPP2Q14168 576 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 DRAP1Q14919 205 aaPredicted RBP8.97□□□□□ -0.97
VAPB-205ENST00000476395 ZNF720Q7Z2F6 126 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 PEX26Q7Z412 305 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 ARHGEF19Q8IW93 802 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 ARL10Q8N8L6 244 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 TAF4BQ92750 862 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 AAASQ9NRG9 546 aa8.97□□□□□ -0.97
VAPB-205ENST00000476395 FOXN3O00409 490 aaPredicted RBP8.96□□□□□ -0.97
VAPB-205ENST00000476395 OAS1P00973 400 aaKnown RBP8.96□□□□□ -0.97
VAPB-205ENST00000476395 H2AFZP0C0S5 128 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 CTNNA2P26232 953 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 PTDSS1P48651 473 aaKnown RBP8.96□□□□□ -0.97
VAPB-205ENST00000476395 HADHBP55084 474 aaKnown RBP8.96□□□□□ -0.97
VAPB-205ENST00000476395 ATP11AP98196 1134 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 CNGA2Q16280 664 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 DOK7Q18PE1 504 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 HHIPL2Q6UWX4 724 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 H2AFVQ71UI9 128 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 SP8Q8IXZ3 490 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 DCAF4Q8WV16 495 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 RBM17Q96I25 401 aaKnown RBP8.96□□□□□ -0.97
VAPB-205ENST00000476395 HERPUD2Q9BSE4 406 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 STK33Q9BYT3 514 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 ACP6Q9NPH0 428 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 DNAJC17Q9NVM6 304 aaKnown RBP8.96□□□□□ -0.97
VAPB-205ENST00000476395 TMOD4Q9NZQ9 345 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 SYNPO2Q9UMS6 1093 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 USP15Q9Y4E8 981 aaPredicted RBP8.96□□□□□ -0.97
VAPB-205ENST00000476395 PCDHB13Q9Y5F0 798 aa8.96□□□□□ -0.97
VAPB-205ENST00000476395 PARP14Q460N5 1801 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 PCNTO95613 3336 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 PIK3CDO00329 1044 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 EIF3DO15371 548 aaKnown RBP eCLIP8.96□□□□□ -0.98
VAPB-205ENST00000476395 RGS16O15492 202 aaPredicted RBP8.96□□□□□ -0.98
VAPB-205ENST00000476395 NDUFB10O96000 172 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 OATP04181 439 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 TPBGLP0DKB5 382 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 LONRF1Q17RB8 773 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 CERKLQ49MI3 558 aaPredicted RBP8.96□□□□□ -0.98
VAPB-205ENST00000476395 SLFN13Q68D06 897 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 OR52E8Q6IFG1 317 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 BTNL9Q6UXG8 535 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 TTC30AQ86WT1 665 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 GMCL1P1Q8NEA9 526 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 DYDC1Q8WWB3 177 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 RFFLQ8WZ73 363 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 KAT5Q92993 513 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 COA1Q9GZY4 146 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 AGPAT3Q9NRZ7 376 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 HAO1Q9UJM8 370 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 DNAJC12Q9UKB3 198 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 LIN7AO14910 233 aaPredicted RBP8.96□□□□□ -0.98
VAPB-205ENST00000476395 HIP1RO75146 1068 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 GCNT3O95395 438 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 ALDH3A1P30838 453 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 RPL21P46778 160 aaKnown RBP8.96□□□□□ -0.98
VAPB-205ENST00000476395 LACTBP83111 547 aaPredicted RBP8.96□□□□□ -0.98
VAPB-205ENST00000476395 IFI16Q16666 785 aaKnown RBP8.96□□□□□ -0.98
VAPB-205ENST00000476395 USH1GQ495M9 461 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 ZNF449Q6P9G9 518 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 FAM81AQ8TBF8 368 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 SPOCK2Q92563 424 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 RAB17Q9H0T7 212 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 ZHX3Q9H4I2 956 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 DNM3Q9UQ16 869 aa8.96□□□□□ -0.98
VAPB-205ENST00000476395 F5H6K3 240 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 CALUO43852 315 aaPredicted RBP8.95□□□□□ -0.98
VAPB-205ENST00000476395 FLOT1O75955 427 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 NAT2P11245 290 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 EPHB2P29323 1055 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 PPP3CAQ08209 521 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 SPP2Q13103 211 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 PPP2R5CQ13362 524 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 RFWD3Q6PCD5 774 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 ECHDC2Q86YB7 292 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 TMEM174Q8WUU8 243 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 SLC5A5Q92911 643 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 GMCL1Q96IK5 515 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 DYDC2Q96IM9 177 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 ZDHHC15Q96MV8 337 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 ERP44Q9BS26 406 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 CNOT10Q9H9A5 744 aaKnown RBP8.95□□□□□ -0.98
VAPB-205ENST00000476395 PREBQ9HCU5 417 aa8.95□□□□□ -0.98
VAPB-205ENST00000476395 NOCTQ9UK39 431 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms