RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 CREMQ03060 361 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 TUSC3Q13454 348 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 DHX8Q14562 1220 aaKnown RBP17.78■□□□□ 0.44
COL1A1-205ENST00000476387 USP41Q3LFD5 358 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 DCAF4L1Q3SXM0 396 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 ATF7IP2Q5U623 682 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 CCDC149Q6ZUS6 474 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 GPBP1Q86WP2 473 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 HDAC7Q8WUI4 952 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 ACSF2Q96CM8 615 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-205ENST00000476387 USP28Q96RU2 1077 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 GPR62Q9BZJ7 368 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 CCSER1Q9C0I3 900 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 MAN1C1Q9NR34 630 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 FNIP2Q9P278 1114 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 ARHGAP28Q9P2N2 729 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 CCDC39Q9UFE4 941 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 FBXO2Q9UK22 296 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-205ENST00000476387 DENND4AQ7Z401 1863 aa17.78■□□□□ 0.44
COL1A1-205ENST00000476387 CACNA1HO95180 2353 aa17.77■□□□□ 0.44
COL1A1-205ENST00000476387 SF3B1O75533 1304 aaKnown RBP eCLIP17.77■□□□□ 0.44
COL1A1-205ENST00000476387 PAPLNO95428 1278 aa17.77■□□□□ 0.44
COL1A1-205ENST00000476387 EDN1P05305 212 aa17.77■□□□□ 0.44
COL1A1-205ENST00000476387 KRT18P05783 430 aaKnown RBP17.77■□□□□ 0.44
COL1A1-205ENST00000476387 PLS3P13797 630 aa17.77■□□□□ 0.44
COL1A1-205ENST00000476387 HSP90AA2PQ14568 343 aaPredicted RBP17.77■□□□□ 0.44
COL1A1-205ENST00000476387 STK38Q15208 465 aa17.77■□□□□ 0.44
COL1A1-205ENST00000476387 OTOP3Q7RTS5 596 aa17.77■□□□□ 0.44
COL1A1-205ENST00000476387 RAD54LQ92698 747 aa17.77■□□□□ 0.44
COL1A1-205ENST00000476387 ZNF396Q96N95 335 aaPredicted RBP17.77■□□□□ 0.44
COL1A1-205ENST00000476387 MRPL4Q9BYD3 311 aaKnown RBP17.77■□□□□ 0.44
COL1A1-205ENST00000476387 TMEM134Q9H6X4 195 aa17.77■□□□□ 0.44
COL1A1-205ENST00000476387 LARSQ9P2J5 1176 aaKnown RBP17.77■□□□□ 0.44
COL1A1-205ENST00000476387 ODF2LQ9ULJ1 636 aa17.77■□□□□ 0.44
COL1A1-205ENST00000476387 SFI1A8K8P3 1242 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 PTGESO14684 152 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 SLC16A4O15374 487 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 TADA2AO75478 443 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 RECQL4O94761 1208 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 BRD1O95696 1058 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 THP07101 528 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 CACNB1Q02641 598 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-205ENST00000476387 STRN3Q13033 797 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 MCM6Q14566 821 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 SLC39A14Q15043 492 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 SPECC1Q5M775 1068 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 FOXD4L5Q5VV16 416 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-205ENST00000476387 EEF1DP3Q658K8 133 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 KRI1Q8N9T8 703 aaKnown RBP17.76■□□□□ 0.43
COL1A1-205ENST00000476387 SPRYD3Q8NCJ5 442 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 FEZF2Q8TBJ5 459 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 SPIRE2Q8WWL2 714 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 FOXD4L4Q8WXT5 416 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-205ENST00000476387 LARP4BQ92615 738 aaKnown RBP17.76■□□□□ 0.43
COL1A1-205ENST00000476387 EPSTI1Q96J88 318 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 CLIC6Q96NY7 704 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 PLEKHA4Q9H4M7 779 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 SNTG2Q9NY99 539 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 LIMD1Q9UGP4 676 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 USP20Q9Y2K6 914 aa17.76■□□□□ 0.43
COL1A1-205ENST00000476387 MORC2Q9Y6X9 1032 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-205ENST00000476387 NPHP3-ACAD11A0A0J9YXS1 232 aa17.75■□□□□ 0.43
COL1A1-205ENST00000476387 H0YCG3 227 aa17.75■□□□□ 0.43
COL1A1-205ENST00000476387 TBCAO75347 108 aaKnown RBP17.75■□□□□ 0.43
COL1A1-205ENST00000476387 FAM13AO94988 1023 aa17.75■□□□□ 0.43
COL1A1-205ENST00000476387 ZSCAN22P10073 491 aaPredicted RBP17.75■□□□□ 0.43
COL1A1-205ENST00000476387 NASPP49321 788 aaPredicted RBP17.75■□□□□ 0.43
COL1A1-205ENST00000476387 ZNF568Q3ZCX4 644 aa17.75■□□□□ 0.43
COL1A1-205ENST00000476387 NT5DC1Q5TFE4 455 aa17.75■□□□□ 0.43
COL1A1-205ENST00000476387 RIN2Q8WYP3 895 aaPredicted RBP17.75■□□□□ 0.43
COL1A1-205ENST00000476387 REEP2Q9BRK0 252 aa17.75■□□□□ 0.43
COL1A1-205ENST00000476387 BLOC1S4Q9NUP1 217 aa17.75■□□□□ 0.43
COL1A1-205ENST00000476387 STK17AQ9UEE5 414 aa17.75■□□□□ 0.43
COL1A1-205ENST00000476387 TNFSF13BQ9Y275 285 aa17.75■□□□□ 0.43
COL1A1-205ENST00000476387 PDCD11Q14690 1871 aaKnown RBP17.74■□□□□ 0.43
COL1A1-205ENST00000476387 C2orf16Q68DN1 1984 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 CCDC195A0A1B0GUA6 201 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 ASGR2P07307 311 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 NUBP1P53384 320 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 PTPN5P54829 565 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 ELAVL2Q12926 359 aaKnown RBP17.74■□□□□ 0.43
COL1A1-205ENST00000476387 NAB2Q15742 525 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 ARSHQ5FYA8 562 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 IER5LQ5T953 404 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 USP49Q70CQ1 688 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 PRSS33Q8NF86 280 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 LRRC15Q8TF66 581 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 B3GALT6Q96L58 329 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 ACO2Q99798 780 aaKnown RBP17.74■□□□□ 0.43
COL1A1-205ENST00000476387 PAAF1Q9BRP4 392 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 WDR6Q9NNW5 1121 aaKnown RBP17.74■□□□□ 0.43
COL1A1-205ENST00000476387 ZDHHC7Q9NXF8 308 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 GDAQ9Y2T3 454 aa17.74■□□□□ 0.43
COL1A1-205ENST00000476387 PLXNA3P51805 1871 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 KMT2EQ8IZD2 1858 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 CASTOR2A6NHX0 329 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 TGM5O43548 720 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 KIF4AO95239 1232 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 F13A1P00488 732 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 RRAGBQ5VZM2 374 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms