RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 GPATCH4Q5T3I0 446 aaKnown RBP5.32□□□□□ -1.56
CCDC39-204ENST00000476379 PPP4R3AQ6IN85 833 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 CENPPQ6IPU0 288 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 RPAINQ86UA6 219 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ZNF784Q8NCA9 323 aaPredicted RBP5.32□□□□□ -1.56
CCDC39-204ENST00000476379 CFAP61Q8NHU2 1237 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 TPCN2Q8NHX9 752 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 TATDN2Q93075 761 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ATG4CQ96DT6 458 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 SLC10A4Q96EP9 437 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 STAMBPL1Q96FJ0 436 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 NT5C1BQ96P26 610 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 RMDN3Q96TC7 470 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 CCDC77Q9BR77 488 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 EFCC1Q9HA90 598 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ABCF3Q9NUQ8 709 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 PI4KBQ9UBF8 816 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 GABBR1Q9UBS5 961 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 RAB21Q9UL25 225 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ITIH6Q6UXX5 1313 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ANKRD12Q6UB98 2062 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.32□□□□□ -1.56
CCDC39-204ENST00000476379 FERP16591 822 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 KCNJ6P48051 423 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 DMP1Q13316 513 aaPredicted RBP5.32□□□□□ -1.56
CCDC39-204ENST00000476379 NAB2Q15742 525 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 MUM1Q2TAK8 710 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 TMEM63BQ5T3F8 832 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 HAUS6Q7Z4H7 955 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 SLFN12Q8IYM2 578 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ANKRD35Q8N283 1001 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 LRRC71Q8N4P6 559 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 SLC25A41Q8N5S1 370 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 EMC1Q8N766 993 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 EFCAB3Q8N7B9 438 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 C4orf32Q8N8J7 132 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 DEPTORQ8TB45 409 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 TGS1Q96RS0 853 aaKnown RBP5.32□□□□□ -1.56
CCDC39-204ENST00000476379 PITPNM3Q9BZ71 974 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 NPHS2Q9NP85 383 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 NGRNQ9NPE2 291 aaKnown RBP5.32□□□□□ -1.56
CCDC39-204ENST00000476379 SIK3Q9Y2K2 1263 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 CSADQ9Y600 493 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 C10orf71Q711Q0 1435 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 C4AP0C0L4 1744 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 H7C0C1 242 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ATXN8OSP0DMR3 200 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 SOX5P35711 763 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ATP5OP48047 213 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 RGS7P49802 495 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 VAMP7P51809 220 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 EPHB1P54762 984 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ZNF844Q08AG5 666 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 STRN3Q13033 797 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 MTMR1Q13613 665 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 GIT2Q14161 759 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 C16orf86Q6ZW13 317 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 TAS1R2Q8TE23 839 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 RSAD2Q8WXG1 361 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ALG3Q92685 438 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 TNFRSF25Q93038 417 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 SPDL1Q96EA4 605 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ERGIC2Q96RQ1 377 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 TTC1Q99614 292 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 EPN3Q9H201 632 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 ECT2Q9H8V3 914 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.32□□□□□ -1.56
CCDC39-204ENST00000476379 DDX20Q9UHI6 824 aaKnown RBP5.32□□□□□ -1.56
CCDC39-204ENST00000476379 TRPC6Q9Y210 931 aa5.32□□□□□ -1.56
CCDC39-204ENST00000476379 LAD1O00515 517 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 NOP56O00567 594 aaKnown RBP5.31□□□□□ -1.56
CCDC39-204ENST00000476379 PYGMP11217 842 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 PAX7P23759 505 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 ABCG1P45844 678 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 KDSRQ06136 332 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 TAF11Q15544 211 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 BRDTQ58F21 947 aaPredicted RBP5.31□□□□□ -1.56
CCDC39-204ENST00000476379 PRAMEF19Q5SWL8 479 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 ANKRD20A3Q5VUR7 823 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 C1orf228Q6PIY5 440 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 LRRC55Q6ZSA7 311 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 LDHDQ86WU2 507 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 CCDC110Q8TBZ0 833 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 BAP1Q92560 729 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 OPTNQ96CV9 577 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 ERP27Q96DN0 273 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 PLVAPQ9BX97 442 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 MAK16Q9BXY0 300 aaKnown RBP5.31□□□□□ -1.56
CCDC39-204ENST00000476379 MIS12Q9H081 205 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 CHST7Q9NS84 486 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 ADAM22Q9P0K1 906 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 PASKQ96RG2 1323 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 O00370 1275 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 IGF2BP3O00425 579 aaKnown RBP eCLIP5.31□□□□□ -1.56
CCDC39-204ENST00000476379 UBOX5O94941 541 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 GNA14O95837 355 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 RALAP11233 206 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 KCNJ2P63252 427 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 SPRED3Q2MJR0 410 aa5.31□□□□□ -1.56
CCDC39-204ENST00000476379 ACCSLQ4AC99 568 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms