RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 BSNDQ8WZ55 320 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 KIF2CQ99661 725 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 TMEM60Q9H2L4 133 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 PDZD7Q9H5P4 517 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 BRMS1Q9HCU9 246 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 SH2B1Q9NRF2 756 aaPredicted RBP17.39■□□□□ 0.37
CDPF1-206ENST00000475605 PRMT7Q9NVM4 692 aaPredicted RBP17.39■□□□□ 0.37
CDPF1-206ENST00000475605 CDH7Q9ULB5 785 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 POLIQ9UNA4 740 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 ZMYM2Q9UBW7 1377 aa17.39■□□□□ 0.37
CDPF1-206ENST00000475605 C8AP07357 584 aa17.38■□□□□ 0.37
CDPF1-206ENST00000475605 XRCC6P12956 609 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDPF1-206ENST00000475605 SNW1Q13573 536 aaKnown RBP17.38■□□□□ 0.37
CDPF1-206ENST00000475605 PPM1LQ5SGD2 360 aa17.38■□□□□ 0.37
CDPF1-206ENST00000475605 CDCA2Q69YH5 1023 aaPredicted RBP17.38■□□□□ 0.37
CDPF1-206ENST00000475605 CATSPER3Q86XQ3 398 aa17.38■□□□□ 0.37
CDPF1-206ENST00000475605 C1orf210Q8IVY1 113 aa17.38■□□□□ 0.37
CDPF1-206ENST00000475605 DIS3L2Q8IYB7 885 aaKnown RBP17.38■□□□□ 0.37
CDPF1-206ENST00000475605 PJA1Q8NG27 643 aa17.38■□□□□ 0.37
CDPF1-206ENST00000475605 ITFG1Q8TB96 612 aa17.38■□□□□ 0.37
CDPF1-206ENST00000475605 FGF13Q92913 245 aa17.38■□□□□ 0.37
CDPF1-206ENST00000475605 RMDN1Q96DB5 314 aa17.38■□□□□ 0.37
CDPF1-206ENST00000475605 PRIMPOLQ96LW4 560 aa17.38■□□□□ 0.37
CDPF1-206ENST00000475605 SEMA4AQ9H3S1 761 aa17.38■□□□□ 0.37
CDPF1-206ENST00000475605 VWA8A3KMH1 1905 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 MED24O75448 989 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 RECQL4O94761 1208 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 THP07101 528 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 HNRNPA1P09651 372 aaKnown RBP eCLIP17.37■□□□□ 0.37
CDPF1-206ENST00000475605 LIG1P18858 919 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 ATP2B1P20020 1258 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 MCM2P49736 904 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 STARD6P59095 220 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 TRIM29Q14134 588 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 FAM187BQ17R55 369 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 LIN9Q5TKA1 542 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 EEF1DP3Q658K8 133 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 MAML2Q8IZL2 1156 aaPredicted RBP17.37■□□□□ 0.37
CDPF1-206ENST00000475605 DCLK2Q8N568 766 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 POLD4Q9HCU8 107 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 HCFC1R1Q9NWW0 138 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 MTF2Q9Y483 593 aaPredicted RBP17.37■□□□□ 0.37
CDPF1-206ENST00000475605 ZFP37Q9Y6Q3 630 aaPredicted RBP17.37■□□□□ 0.37
CDPF1-206ENST00000475605 CACNA1IQ9P0X4 2223 aa17.37■□□□□ 0.37
CDPF1-206ENST00000475605 OR1D2P34982 312 aa17.36■□□□□ 0.37
CDPF1-206ENST00000475605 PRPF4BQ13523 1007 aaKnown RBP17.36■□□□□ 0.37
CDPF1-206ENST00000475605 TMEM132AQ24JP5 1023 aa17.36■□□□□ 0.37
CDPF1-206ENST00000475605 AXDND1Q5T1B0 1012 aaPredicted RBP17.36■□□□□ 0.37
CDPF1-206ENST00000475605 RSPO2Q6UXX9 243 aaPredicted RBP17.36■□□□□ 0.37
CDPF1-206ENST00000475605 ZBTB8OSQ8IWT0 167 aa17.36■□□□□ 0.37
CDPF1-206ENST00000475605 NSUN7Q8NE18 718 aaKnown RBP17.36■□□□□ 0.37
CDPF1-206ENST00000475605 SLC7A14Q8TBB6 771 aa17.36■□□□□ 0.37
CDPF1-206ENST00000475605 GDAQ9Y2T3 454 aa17.36■□□□□ 0.37
CDPF1-206ENST00000475605 FANCMQ8IYD8 2048 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 NOTCH4Q99466 2003 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 KANSL1LA0AUZ9 987 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 N4BP3O15049 544 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 JAK2O60674 1132 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 PRKCBP05771 671 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 CD72P21854 359 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 MCM7P33993 719 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 CCDC83Q8IWF9 413 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 MCPH1Q8NEM0 835 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 HINFPQ9BQA5 517 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 KXD1Q9BQD3 176 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 LLPHQ9BRT6 129 aaKnown RBP17.35■□□□□ 0.37
CDPF1-206ENST00000475605 CCDC113Q9H0I3 377 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 TUFT1Q9NNX1 390 aa17.35■□□□□ 0.37
CDPF1-206ENST00000475605 DNMT3BQ9UBC3 853 aaKnown RBP17.35■□□□□ 0.37
CDPF1-206ENST00000475605 ACKR2O00590 384 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 XYLBO75191 536 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 FGFR3P22607 806 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 RAB33AQ14088 237 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 MLF2Q15773 248 aaPredicted RBP17.34■□□□□ 0.37
CDPF1-206ENST00000475605 MAPK6Q16659 721 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 SLC44A4Q53GD3 710 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 GLRA4Q5JXX5 417 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 POTEHQ6S545 545 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 PADI6Q6TGC4 694 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 CD300LGQ6UXG3 332 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 ING5Q8WYH8 240 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 SHDQ96IW2 340 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 NACC1Q96RE7 527 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 DDX23Q9BUQ8 820 aaKnown RBP17.34■□□□□ 0.37
CDPF1-206ENST00000475605 KIFC3Q9BVG8 833 aa17.34■□□□□ 0.37
CDPF1-206ENST00000475605 MIA3Q5JRA6 1907 aa17.33■□□□□ 0.37
CDPF1-206ENST00000475605 MED19A0JLT2 244 aaPredicted RBP17.33■□□□□ 0.36
CDPF1-206ENST00000475605 I3L4J1 428 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 HOXA9P31269 272 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 ELAVL2Q12926 359 aaKnown RBP17.33■□□□□ 0.36
CDPF1-206ENST00000475605 UBXN2BQ14CS0 331 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 ZC3H14Q6PJT7 736 aaKnown RBP17.33■□□□□ 0.36
CDPF1-206ENST00000475605 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.33■□□□□ 0.36
CDPF1-206ENST00000475605 MTSS1LQ765P7 747 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 NPAS3Q8IXF0 933 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 FAM184AQ8NB25 1140 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 SUMF1Q8NBK3 374 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 ADPGKQ9BRR6 497 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 C2orf40Q9H1Z8 148 aa17.33■□□□□ 0.36
CDPF1-206ENST00000475605 GOLGA2P5Q9HBQ8 144 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms