RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 MRI1Q9BV20 369 aa6.29□□□□□ -1.4
LTN1-204ENST00000475344 WDR11Q9BZH6 1224 aa6.29□□□□□ -1.4
LTN1-204ENST00000475344 AJAP1Q9UKB5 411 aaPredicted RBP6.29□□□□□ -1.4
LTN1-204ENST00000475344 ATP11BQ9Y2G3 1177 aa6.29□□□□□ -1.4
LTN1-204ENST00000475344 GAGE12BA1L429 117 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 GAGE12HA6NDE8 117 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 B3GALT2O43825 422 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 IL2RBP14784 551 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 ALOX15P16050 662 aaPredicted RBP6.28□□□□□ -1.4
LTN1-204ENST00000475344 ATP5JP18859 108 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 MCAMP43121 646 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 ERVK-21P61565 698 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 SP140Q13342 867 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 BEAN1Q3B7T3 259 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 CMTR2Q8IYT2 770 aaKnown RBP6.28□□□□□ -1.4
LTN1-204ENST00000475344 LCORLQ8N3X6 602 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 NEU1Q99519 415 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 MOCS1Q9NZB8 636 aa6.28□□□□□ -1.4
LTN1-204ENST00000475344 RUVBL1Q9Y265 456 aaKnown RBP6.28□□□□□ -1.4
LTN1-204ENST00000475344 ENDOD1O94919 500 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 HLA-DOAP06340 250 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 POU3F3P20264 500 aaPredicted RBP6.27□□□□□ -1.41
LTN1-204ENST00000475344 FPR1P21462 350 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 ALDH1A3P47895 512 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 PURAQ00577 322 aaKnown RBP6.27□□□□□ -1.41
LTN1-204ENST00000475344 GUCY1B3Q02153 619 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 RESTQ13127 1097 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 GJC2Q5T442 439 aaPredicted RBP6.27□□□□□ -1.41
LTN1-204ENST00000475344 HECTD2Q5U5R9 776 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 TSHZ3Q63HK5 1081 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 PCSK4Q6UW60 755 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 BEND2Q8NDZ0 799 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 GPR150Q8NGU9 434 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 SERHL2Q9H4I8 314 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 TMEM140Q9NV12 185 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 SLC5A4Q9NY91 659 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 GPR45Q9Y5Y3 372 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 FPGT-TNNI3KV9GXZ4 949 aa6.27□□□□□ -1.41
LTN1-204ENST00000475344 PNPLA7Q6ZV29 1317 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 TMEM200CA6NKL6 621 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 BMP5P22003 454 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 DDX6P26196 483 aaKnown RBP eCLIP6.26□□□□□ -1.41
LTN1-204ENST00000475344 ZEB1P37275 1124 aaPredicted RBP6.26□□□□□ -1.41
LTN1-204ENST00000475344 MTNR1BP49286 362 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 USP14P54578 494 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 MXRA7P84157 204 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 KLF1Q13351 362 aaPredicted RBP6.26□□□□□ -1.41
LTN1-204ENST00000475344 TP53BP2Q13625 1128 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 SEPT2Q15019 361 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 ZNF529Q6P280 563 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 UBE3BQ7Z3V4 1068 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 DDX42Q86XP3 938 aaKnown RBP eCLIP6.26□□□□□ -1.41
LTN1-204ENST00000475344 DNAJC10Q8IXB1 793 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 CNTD1Q8N815 330 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 SUPT20HQ8NEM7 779 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 OR56A1Q8NGH5 318 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 HOXB13Q92826 284 aaPredicted RBP6.26□□□□□ -1.41
LTN1-204ENST00000475344 RNF181Q9P0P0 153 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 ACTL7AQ9Y615 435 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 ATRNL1Q5VV63 1379 aa6.26□□□□□ -1.41
LTN1-204ENST00000475344 GRID2IPA4D2P6 1211 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 IGSF3O75054 1194 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 RHOBTB3O94955 611 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 POMCP01189 267 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 NANOS3P60323 173 aaKnown RBP6.25□□□□□ -1.41
LTN1-204ENST00000475344 ACAP2Q15057 778 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 METRNLQ641Q3 311 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 PGM2L1Q6PCE3 622 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 ARHGEF19Q8IW93 802 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 DRC7Q8IY82 874 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 DPF2Q92785 391 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 CAVIN3Q969G5 261 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 MYOCQ99972 504 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 ZSWIM1Q9BR11 485 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 REXO4Q9GZR2 422 aaKnown RBP6.25□□□□□ -1.41
LTN1-204ENST00000475344 SPC25Q9HBM1 224 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 PACSIN3Q9UKS6 424 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 SIK3Q9Y2K2 1263 aa6.25□□□□□ -1.41
LTN1-204ENST00000475344 POLR2AP24928 1970 aaKnown RBP6.24□□□□□ -1.41
LTN1-204ENST00000475344 PHLDB1Q86UU1 1377 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 FAM171A2A8MVW0 826 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 GPR32O75388 356 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 MT-CO1P00395 513 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 AGXTP21549 392 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 SLC6A2P23975 617 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 GUCY1A2P33402 732 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 BMPR1AP36894 532 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 IARSP41252 1262 aaKnown RBP6.24□□□□□ -1.41
LTN1-204ENST00000475344 AGAP9Q5VTM2 703 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 Q6YL49 198 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 MAPKAPK5Q8IW41 473 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 RHOT2Q8IXI1 618 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 RHOT1Q8IXI2 618 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 OR2I1PQ8NGU4 316 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 NRG4Q8WWG1 115 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 FUBP3Q96I24 572 aaKnown RBP eCLIP6.24□□□□□ -1.41
LTN1-204ENST00000475344 CRAMP1Q96RY5 1269 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 ADAM2Q99965 735 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 INTUQ9ULD6 942 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms