RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 VPS54Q9P1Q0 977 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 DNMT3BQ9UBC3 853 aaKnown RBP15.68■□□□□ 0.1
ATG9A-220ENST00000475339 KCNH3Q9ULD8 1083 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 IGSF10Q6WRI0 2623 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 NOTCH4Q99466 2003 aa15.68■□□□□ 0.1
ATG9A-220ENST00000475339 EPN2O95208 641 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 SREBF1P36956 1147 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 PRKCEQ02156 737 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 RABEP1Q15276 862 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 PLA2G2CQ5R387 149 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 SH3PXD2AQ5TCZ1 1133 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 KSR1Q8IVT5 923 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 GPR65Q8IYL9 337 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 NECAB1Q8N987 351 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 GTF3C6Q969F1 213 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 ELSPBP1Q96BH3 223 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 GAD1Q99259 594 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 ZNF577Q9BSK1 485 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 ZMYND12Q9H0C1 365 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 RBM12Q9NTZ6 932 aaKnown RBP15.67■□□□□ 0.1
ATG9A-220ENST00000475339 AGPAT5Q9NUQ2 364 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 TCEAL9Q9UHQ7 104 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 MRPS23Q9Y3D9 190 aaKnown RBP15.67■□□□□ 0.1
ATG9A-220ENST00000475339 SAMM50Q9Y512 469 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 PIAS3Q9Y6X2 628 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 SPAG17Q6Q759 2223 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 STK36Q9NRP7 1315 aa15.67■□□□□ 0.1
ATG9A-220ENST00000475339 IGLV3-22A0A075B6J6 115 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 C4orf47A7E2U8 309 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 NR1I2O75469 434 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 PAPSS2O95340 614 aaPredicted RBP15.66■□□□□ 0.1
ATG9A-220ENST00000475339 XBP1P17861 261 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 HOXA9P31269 272 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 RAP1GAPP47736 663 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 NLRP5P59047 1200 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 CREMQ03060 361 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 ME3Q16798 604 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 RTP2Q5QGT7 225 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 UBXN11Q5T124 520 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 JAKMIP3Q5VZ66 844 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 C19orf48Q6RUI8 117 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 KBTBD6Q86V97 674 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 RHPN2Q8IUC4 686 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 SLC7A14Q8TBB6 771 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 RABGGTAQ92696 567 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 NLRP4Q96MN2 994 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 CLSTN3Q9BQT9 956 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 SH3GLB2Q9NR46 395 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 TBC1D22BQ9NU19 505 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 MIOSQ9NXC5 875 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 GDE1Q9NZC3 331 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 LIMCH1Q9UPQ0 1083 aa15.66■□□□□ 0.1
ATG9A-220ENST00000475339 LAMA1P25391 3075 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 ARL5CA6NH57 179 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 NRG2O14511 850 aaPredicted RBP15.65■□□□□ 0.1
ATG9A-220ENST00000475339 LARGE1O95461 756 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 CCNE1P24864 410 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 MPLP40238 635 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 MLH1P40692 756 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 SCNN1GP51170 649 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 PTGDRQ13258 359 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 TARBP2Q15633 366 aaKnown RBP15.65■□□□□ 0.1
ATG9A-220ENST00000475339 UGCGQ16739 394 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 SLC5A9Q2M3M2 681 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 KIAA1211LQ6NV74 962 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 Q6ZS52 159 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 PDZD3Q86UT5 571 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 ZNF410Q86VK4 478 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 WDR5BQ86VZ2 330 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 WASF1Q92558 559 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 ZFP42Q96MM3 310 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 TRMT61BQ9BVS5 477 aaKnown RBP15.65■□□□□ 0.1
ATG9A-220ENST00000475339 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
ATG9A-220ENST00000475339 ZNF334Q9HCZ1 680 aaPredicted RBP15.65■□□□□ 0.1
ATG9A-220ENST00000475339 SUCLA2Q9P2R7 463 aaPredicted RBP15.65■□□□□ 0.1
ATG9A-220ENST00000475339 ADAMTS20P59510 1910 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 ADAM12O43184 909 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 ITGA4P13612 1032 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 FCARP24071 287 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 HOXA11P31270 313 aaPredicted RBP15.64■□□□□ 0.09
ATG9A-220ENST00000475339 CACNA2D4Q7Z3S7 1137 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 MAP4K3Q8IVH8 894 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 SMG8Q8ND04 991 aaKnown RBP15.64■□□□□ 0.09
ATG9A-220ENST00000475339 IRF7Q92985 503 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 TBC1D32Q96NH3 1257 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 KIF2CQ99661 725 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 SH2D3AQ9BRG2 576 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 EDEM2Q9BV94 578 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 ORC3Q9UBD5 711 aaPredicted RBP15.64■□□□□ 0.09
ATG9A-220ENST00000475339 ADAM28Q9UKQ2 775 aa15.64■□□□□ 0.09
ATG9A-220ENST00000475339 TMEM150BA6NC51 233 aa15.63■□□□□ 0.09
ATG9A-220ENST00000475339 CYSRT1A8MQ03 144 aa15.63■□□□□ 0.09
ATG9A-220ENST00000475339 RPP40O75818 363 aaKnown RBP15.63■□□□□ 0.09
ATG9A-220ENST00000475339 POU2F2P09086 479 aa15.63■□□□□ 0.09
ATG9A-220ENST00000475339 CEBPBP17676 345 aa15.63■□□□□ 0.09
ATG9A-220ENST00000475339 GDI1P31150 447 aa15.63■□□□□ 0.09
ATG9A-220ENST00000475339 CLK2P49760 499 aaKnown RBP15.63■□□□□ 0.09
ATG9A-220ENST00000475339 DNM2P50570 870 aa15.63■□□□□ 0.09
ATG9A-220ENST00000475339 MTERF2Q49AM1 385 aa15.63■□□□□ 0.09
ATG9A-220ENST00000475339 FAM78AQ5JUQ0 283 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms