RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CEP72Q9P209 647 aa7.19□□□□□ -1.26
ATG4A-207ENST00000474825 CPSF3Q9UKF6 684 aaKnown RBP7.19□□□□□ -1.26
ATG4A-207ENST00000474825 PYCARDQ9ULZ3 195 aa7.19□□□□□ -1.26
ATG4A-207ENST00000474825 LUC7L2Q9Y383 392 aaKnown RBP7.19□□□□□ -1.26
ATG4A-207ENST00000474825 INO80B-WBP1J3KQ70 363 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 B4GALT4O60513 344 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 TSPAN1O60635 241 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 C4BPAP04003 597 aaKnown RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 VTNP04004 478 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 TPM1P09493 284 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 CYP2C9P11712 490 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 UCHL3P15374 230 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 TRIM21P19474 475 aaKnown RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 SLC9A1P19634 815 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 RFX1P22670 979 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 EIF4BP23588 611 aaKnown RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 AXLP30530 894 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 HOXA11P31270 313 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 ACLYP53396 1101 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 AP3M2P53677 418 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 JAM2P57087 298 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 NLRP11P59045 1033 aaKnown RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 MGAT3Q09327 533 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 PRPF4BQ13523 1007 aaKnown RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 NOLC1Q14978 699 aaKnown RBP eCLIP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 SURF1Q15526 300 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 KYAT1Q16773 422 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 TRIM71Q2Q1W2 868 aaKnown RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 ZACNQ401N2 412 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 FAM26DQ5JW98 314 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 ATF7IP2Q5U623 682 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 EEF1DP3Q658K8 133 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 GDF6Q6KF10 455 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 FAM43BQ6ZT52 329 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 TMTC1Q8IUR5 882 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 RDH13Q8NBN7 331 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 ZNF397Q8NF99 534 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 VTI1AQ96AJ9 217 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 SAAL1Q96ER3 474 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 BICD1Q96G01 975 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 NLRP4Q96MN2 994 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 BAG1Q99933 345 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 FAM213AQ9BRX8 229 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 MSTO1Q9BUK6 570 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 GCOM2Q9BZD3 368 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 TMEM117Q9H0C3 514 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 CDT1Q9H211 546 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 MMRN2Q9H8L6 949 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 TMEM8AQ9HCN3 771 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 PAK6Q9NQU5 681 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-207ENST00000474825 AIPL1Q9NZN9 384 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 AKT3Q9Y243 479 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 PTPN22Q9Y2R2 807 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 PTCH2Q9Y6C5 1203 aa7.18□□□□□ -1.26
ATG4A-207ENST00000474825 GOLGA8IPA6NC78 632 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 GOLGA8JA6NMD2 632 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 PES1O00541 588 aaKnown RBP7.17□□□□□ -1.26
ATG4A-207ENST00000474825 B4GALT5O43286 388 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 ZC3H11AO75152 810 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATG4A-207ENST00000474825 CAND2O75155 1236 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 LCA5LO95447 670 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 CLTAP09496 248 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 TRIM49P0CI25 452 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 TRIM49CP0CI26 452 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 ARF4P18085 180 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-207ENST00000474825 PRKCIP41743 596 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 CDK7P50613 346 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 WNT7BP56706 349 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 ZNF200P98182 395 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-207ENST00000474825 MYL7Q01449 175 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 GOLGA8FQ08AF8 430 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 GOLGA8DPQ0D2H9 430 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 PTK7Q13308 1070 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 CAMK2BQ13554 666 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 SNX17Q15036 470 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 ASTE1Q2TB18 679 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-207ENST00000474825 DCAF17Q5H9S7 520 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-207ENST00000474825 ZBTB41Q5SVQ8 909 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 TCERG1LQ5VWI1 586 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 E4F1Q66K89 784 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-207ENST00000474825 HGSNATQ68CP4 663 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 KRT39Q6A163 491 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 PDXDC1Q6P996 788 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 TRIM65Q6PJ69 517 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 CYP26C1Q6V0L0 522 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 ZNF662Q6ZS27 426 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 TRIM67Q6ZTA4 783 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 SV2AQ7L0J3 742 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 IRF2BP2Q7Z5L9 587 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 CCDC170Q8IYT3 715 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 NEK11Q8NG66 645 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 DNAJB3Q8WWF6 145 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 NLRP7Q8WX94 980 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 FAXDC2Q96IV6 333 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 CRACR2AQ9BSW2 395 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 TRAIPQ9BWF2 469 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 LSM14BQ9BX40 385 aaKnown RBP7.17□□□□□ -1.26
ATG4A-207ENST00000474825 CELF4Q9BZC1 486 aaKnown RBP7.17□□□□□ -1.26
ATG4A-207ENST00000474825 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATG4A-207ENST00000474825 INTS2Q9H0H0 1204 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms