RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 N4BP3O15049 544 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 XYLBO75191 536 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 RECQL4O94761 1208 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 THP07101 528 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 HNRNPA1P09651 372 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC78-209ENST00000474647 GLULP15104 373 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 ATP2B1P20020 1258 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 SNW1Q13573 536 aaKnown RBP15.47■□□□□ 0.07
CCDC78-209ENST00000474647 MTSS1LQ765P7 747 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 SLC7A14Q8TBB6 771 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 PIK3R5Q8WYR1 880 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 TNFRSF25Q93038 417 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 SHDQ96IW2 340 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 PRIMPOLQ96LW4 560 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 KXD1Q9BQD3 176 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 CLSTN3Q9BQT9 956 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 PDZD7Q9H5P4 517 aa15.47■□□□□ 0.07
CCDC78-209ENST00000474647 KIF26AQ9ULI4 1882 aaPredicted RBP15.47■□□□□ 0.07
CCDC78-209ENST00000474647 CEP250Q9BV73 2442 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 COL4A2P08572 1712 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 TTLL13PA6NNM8 815 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 WNT7AO00755 349 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 PTGESO14684 152 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 ADAM12O43184 909 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 PRPF4BQ13523 1007 aaKnown RBP15.46■□□□□ 0.07
CCDC78-209ENST00000474647 UBXN2BQ14CS0 331 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 NOSTRINQ8IVI9 506 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 NECAB1Q8N987 351 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 MCPH1Q8NEM0 835 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 LNX1Q8TBB1 728 aaPredicted RBP15.46■□□□□ 0.07
CCDC78-209ENST00000474647 FGF13Q92913 245 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 ADPGKQ9BRR6 497 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 CXCL16Q9H2A7 254 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 SPATA6Q9NWH7 488 aaPredicted RBP15.46■□□□□ 0.07
CCDC78-209ENST00000474647 HCFC1R1Q9NWW0 138 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 USP20Q9Y2K6 914 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 GDAQ9Y2T3 454 aa15.46■□□□□ 0.07
CCDC78-209ENST00000474647 BTBD18B2RXH4 712 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 PRKCBP05771 671 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 FDPSP14324 419 aaKnown RBP15.45■□□□□ 0.06
CCDC78-209ENST00000474647 STARD6P59095 220 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 ELAVL2Q12926 359 aaKnown RBP15.45■□□□□ 0.06
CCDC78-209ENST00000474647 TRIM29Q14134 588 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 MLF2Q15773 248 aaPredicted RBP15.45■□□□□ 0.06
CCDC78-209ENST00000474647 MAPK6Q16659 721 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 AXDND1Q5T1B0 1012 aaPredicted RBP15.45■□□□□ 0.06
CCDC78-209ENST00000474647 CDCA2Q69YH5 1023 aaPredicted RBP15.45■□□□□ 0.06
CCDC78-209ENST00000474647 PDXDC1Q6P996 788 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 DGLUCYQ7Z3D6 616 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 DIS3L2Q8IYB7 885 aaKnown RBP15.45■□□□□ 0.06
CCDC78-209ENST00000474647 DCLK2Q8N568 766 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 ITFG1Q8TB96 612 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 ING5Q8WYH8 240 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 RUBCNQ92622 972 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 BCO2Q9BYV7 579 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 C2orf40Q9H1Z8 148 aa15.45■□□□□ 0.06
CCDC78-209ENST00000474647 KANSL1LA0AUZ9 987 aa15.44■□□□□ 0.06
CCDC78-209ENST00000474647 KINO60870 393 aaKnown RBP15.44■□□□□ 0.06
CCDC78-209ENST00000474647 LARGE1O95461 756 aa15.44■□□□□ 0.06
CCDC78-209ENST00000474647 HOXA9P31269 272 aa15.44■□□□□ 0.06
CCDC78-209ENST00000474647 OR1D2P34982 312 aa15.44■□□□□ 0.06
CCDC78-209ENST00000474647 PABPC1LQ4VXU2 614 aaKnown RBP15.44■□□□□ 0.06
CCDC78-209ENST00000474647 GLRA4Q5JXX5 417 aa15.44■□□□□ 0.06
CCDC78-209ENST00000474647 DEPTORQ8TB45 409 aa15.44■□□□□ 0.06
CCDC78-209ENST00000474647 BSNDQ8WZ55 320 aa15.44■□□□□ 0.06
CCDC78-209ENST00000474647 MTMR9Q96QG7 549 aa15.44■□□□□ 0.06
CCDC78-209ENST00000474647 FZD8Q9H461 694 aa15.44■□□□□ 0.06
CCDC78-209ENST00000474647 TCHHQ07283 1943 aa15.44■□□□□ 0.06
CCDC78-209ENST00000474647 MED19A0JLT2 244 aaPredicted RBP15.43■□□□□ 0.06
CCDC78-209ENST00000474647 LAMTOR5O43504 91 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 MED24O75448 989 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 EDN1P05305 212 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 SPATA31C1P0DKV0 1188 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 XRCC6P12956 609 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCDC78-209ENST00000474647 CD72P21854 359 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 MCM7P33993 719 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 PRKCQQ04759 706 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 ANKRD1Q15327 319 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 NAB2Q15742 525 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 FAM187BQ17R55 369 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 SLC44A4Q53GD3 710 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 EEF1DP3Q658K8 133 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
CCDC78-209ENST00000474647 CATSPER3Q86XQ3 398 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 GTF3C6Q969F1 213 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 TMEM60Q9H2L4 133 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 TUFT1Q9NNX1 390 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 MTF2Q9Y483 593 aaPredicted RBP15.43■□□□□ 0.06
CCDC78-209ENST00000474647 CDY1Q9Y6F8 540 aa15.43■□□□□ 0.06
CCDC78-209ENST00000474647 ZNF638Q14966 1978 aaKnown RBP15.43■□□□□ 0.06
CCDC78-209ENST00000474647 NUP210Q8TEM1 1887 aaPredicted RBP15.42■□□□□ 0.06
CCDC78-209ENST00000474647 ARHGEF35A5YM69 484 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 I3L4J1 428 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 CLCNKBP51801 687 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 PFKPQ01813 784 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 ME3Q16798 604 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 PADI6Q6TGC4 694 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 NPAS3Q8IXF0 933 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 MAML2Q8IZL2 1156 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms