RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 NHSQ6T4R5 1651 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 FAM196BA6NMK8 535 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 SLC26A4O43511 780 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 TOM1O60784 492 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 TJP3O95049 919 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 RGS9BPQ6ZS82 235 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 LRRC47Q8N1G4 583 aaKnown RBP19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 MAML1Q92585 1016 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 LBHD1Q9BQE6 289 aaPredicted RBP19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 TIPINQ9BVW5 301 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 CADM1Q9BY67 442 aaKnown RBP19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 ANKRD2Q9GZV1 360 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 JMJD4Q9H9V9 463 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 METTL5Q9NRN9 209 aaKnown RBP19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 ZFP69BQ9UJL9 534 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 NUMBLQ9Y6R0 609 aa19.84■□□□□ 0.77
ECHDC1-214ENST00000474289 MUTP22033 750 aa19.83■□□□□ 0.77
ECHDC1-214ENST00000474289 SPDYAQ5MJ70 313 aa19.83■□□□□ 0.77
ECHDC1-214ENST00000474289 CCDC125Q86Z20 511 aa19.83■□□□□ 0.77
ECHDC1-214ENST00000474289 DENND1AQ8TEH3 1009 aa19.83■□□□□ 0.77
ECHDC1-214ENST00000474289 ATG4AQ8WYN0 398 aa19.83■□□□□ 0.77
ECHDC1-214ENST00000474289 CHST7Q9NS84 486 aa19.83■□□□□ 0.77
ECHDC1-214ENST00000474289 IRS2Q9Y4H2 1338 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 PNMA6FA0A0J9YX94 578 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 KRT36O76013 467 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 SPATA31C1P0DKV0 1188 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 NOVP48745 357 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 SPIRE1Q08AE8 756 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 CTC1Q2NKJ3 1217 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 ZC2HC1CQ53FD0 456 aaPredicted RBP19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 ASPRV1Q53RT3 343 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 CFAP61Q8NHU2 1237 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 FAM81AQ8TBF8 368 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 MORC4Q8TE76 937 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 MAIP1Q8WWC4 291 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 GATA6Q92908 595 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 C9orf72Q96LT7 481 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 TRAIPQ9BWF2 469 aa19.83■□□□□ 0.76
ECHDC1-214ENST00000474289 SFI1A8K8P3 1242 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 DYNC1I2Q13409 638 aaKnown RBP19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 PTK6Q13882 451 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 SPARCL1Q14515 664 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 COG2Q14746 738 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 STAT4Q14765 748 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 PDK4Q16654 411 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 ACSBG2Q5FVE4 666 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 LRRC74BQ6ZQY2 392 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 KSR1Q8IVT5 923 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 CAPN9O14815 690 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 TBCAO75347 108 aaKnown RBP19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 MTA2O94776 668 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 POLD1P28340 1107 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 RANBP1P43487 201 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 SERPINB4P48594 390 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 VPS41P49754 854 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 PPP4CP60510 307 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 SLC45A4Q5BKX6 768 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 SLC10A5Q5PT55 438 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 NLRP9Q7RTR0 991 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 MTDHQ86UE4 582 aaKnown RBP19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 TRABD2AQ86V40 505 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 KIAA0825Q8IV33 1275 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 ADGRF4Q8IZF3 695 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 GPR101Q96P66 508 aaPredicted RBP19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 UBE2OQ9C0C9 1292 aaKnown RBP19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 PSTPIP2Q9H939 334 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 ANAPC5Q9UJX4 755 aa19.82■□□□□ 0.76
ECHDC1-214ENST00000474289 MAGEA13PA6NCF6 341 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 FSCN2O14926 492 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 TBX10O75333 385 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 ATF2P15336 505 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 MYL7Q01449 175 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 CLNKQ7Z7G1 428 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 ZNF564Q8TBZ8 553 aaPredicted RBP19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 CCDC77Q9BR77 488 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 BHMT2Q9H2M3 363 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 ATF5Q9Y2D1 282 aaPredicted RBP19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 SH3BP1Q9Y3L3 701 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 ROBO1Q9Y6N7 1651 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 USP17L15C9J2P7 530 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 USP17L13C9JLJ4 530 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 USP17L11C9JVI0 530 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 USP17L18D6R9N7 530 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 USP17L22D6RA61 530 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 USP17L17D6RBQ6 530 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 USP17L19D6RCP7 530 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 USP17L20D6RJB6 530 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 RPA1P27694 616 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 RBM5P52756 815 aaKnown RBP eCLIP19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 USP17L24Q0WX57 530 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 KPNB1Q14974 876 aaKnown RBP19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 USP17L6PQ6QN14 398 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 ATL2Q8NHH9 583 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 PSPC1Q8WXF1 523 aaKnown RBP19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 UBN1Q9NPG3 1134 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 SAR1AQ9NR31 198 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 LMCD1Q9NZU5 365 aa19.81■□□□□ 0.76
ECHDC1-214ENST00000474289 PRPF4O43172 522 aaKnown RBP eCLIP19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 KCNQ2O43526 872 aa19.8■□□□□ 0.76
ECHDC1-214ENST00000474289 SORBS3O60504 671 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms