RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	PTPN7	P35236	360 aa		4.98	□□□□□ -1.61
TMEM50B-208	ENST00000474272	RAP2B	P61225	183 aa		4.98	□□□□□ -1.61
TMEM50B-208	ENST00000474272	ERCC6L	Q2NKX8	1250 aa		4.98	□□□□□ -1.61
TMEM50B-208	ENST00000474272	TSHZ3	Q63HK5	1081 aa		4.98	□□□□□ -1.61
TMEM50B-208	ENST00000474272	FKBP9P1	Q75LS8	142 aa		4.98	□□□□□ -1.61
TMEM50B-208	ENST00000474272	GPR149	Q86SP6	731 aa		4.98	□□□□□ -1.61
TMEM50B-208	ENST00000474272	OR56A1	Q8NGH5	318 aa		4.98	□□□□□ -1.61
TMEM50B-208	ENST00000474272	EAF2	Q96CJ1	260 aa	Predicted RBP	4.98	□□□□□ -1.61
TMEM50B-208	ENST00000474272		Q96MF0	132 aa		4.98	□□□□□ -1.61
TMEM50B-208	ENST00000474272	ZSWIM1	Q9BR11	485 aa		4.98	□□□□□ -1.61
TMEM50B-208	ENST00000474272	CDY2A	Q9Y6F7	541 aa		4.98	□□□□□ -1.61
TMEM50B-208	ENST00000474272	PNPLA7	Q6ZV29	1317 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	CCDC78	A2IDD5	438 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	MGST3	O14880	152 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	CDKL5	O76039	1030 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	CFI	P05156	583 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	CNGA1	P29973	690 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	SOX5	P35711	763 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	LSS	P48449	732 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	CCT2	P78371	535 aa	Known RBP	4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	MPP3	Q13368	585 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	PDCD1	Q15116	288 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	DDB1	Q16531	1140 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	MED25	Q71SY5	747 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	STRA8	Q7Z7C7	330 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	AFAP1L2	Q8N4X5	818 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	ZFP28	Q8NHY6	868 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	LEO1	Q8WVC0	666 aa	Predicted RBP	4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	SPATA5L1	Q9BVQ7	753 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	BRINP2	Q9C0B6	783 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	KIAA1586	Q9HCI6	787 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	EMC7	Q9NPA0	242 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	KCNG1	Q9UIX4	513 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	TLK1	Q9UKI8	766 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	ATP11B	Q9Y2G3	1177 aa		4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	NOC2L	Q9Y3T9	749 aa	Known RBP	4.97	□□□□□ -1.61
TMEM50B-208	ENST00000474272	CXorf49	A8MYA2	514 aa	Predicted RBP	4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	CDK17	Q00537	523 aa		4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	AGAP9	Q5VTM2	703 aa		4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ARHGEF25	Q86VW2	580 aa		4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	MAPKAPK5	Q8IW41	473 aa		4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	AHI1	Q8N157	1196 aa		4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ZCRB1	Q8TBF4	217 aa	Known RBP	4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	STON2	Q8WXE9	905 aa		4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	PUS7	Q96PZ0	661 aa	Known RBP	4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ALOXE3	Q9BYJ1	711 aa		4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	KLHL11	Q9NVR0	708 aa		4.96	□□□□□ -1.62
TMEM50B-208	ENST00000474272	AATK	Q6ZMQ8	1374 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	MATN4	O95460	622 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	FOS	P01100	380 aa	Predicted RBP	4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	IGLV2-14	P01704	120 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	CLRN1	P58418	232 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	KRTAP10-11	P60412	298 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	SIM1	P81133	766 aa	Predicted RBP	4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	OCRL	Q01968	901 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	MEF2A	Q02078	507 aa	Predicted RBP	4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	PDZD4	Q76G19	769 aa	Predicted RBP	4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	C11orf74	Q86VG3	221 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	TMEM132C	Q8N3T6	1108 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	OR2W6P	Q8NHA6	318 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ZNF384	Q8TF68	577 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ZNF480	Q8WV37	535 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	RSAD2	Q8WXG1	361 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	SLC5A5	Q92911	643 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	DPP7	Q9UHL4	492 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	NOP58	Q9Y2X3	529 aa	Known RBP	4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	MAST3	O60307	1309 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	RPTOR	Q8N122	1335 aa		4.95	□□□□□ -1.62
TMEM50B-208	ENST00000474272	hCG_2014768	A0A024R1R8	64 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	LRRC3C	A6NJW4	275 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	AKR1B10	O60218	316 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	PRSS23	O95084	383 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	GAST	P01350	101 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	CDK4	P11802	303 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	FDXR	P22570	491 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	FLT3LG	P49771	235 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	CDKN1C	P49918	316 aa	Predicted RBP	4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ELL	P55199	621 aa	Predicted RBP	4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	OCA2	Q04671	838 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	STRN3	Q13033	797 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ZNF169	Q14929	603 aa	Predicted RBP	4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	DHCR24	Q15392	516 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	FAM47A	Q5JRC9	791 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	PAPD7	Q5XG87	772 aa	Known RBP	4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	RHOT2	Q8IXI1	618 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	TRMT2A	Q8IZ69	625 aa	Known RBP	4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	CAGE1	Q8TC20	777 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	RIN2	Q8WYP3	895 aa	Predicted RBP	4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	RNF31	Q96EP0	1072 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	DUSP26	Q9BV47	211 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	WNT8A	Q9H1J5	351 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	FRMD4B	Q9Y2L6	1034 aa		4.94	□□□□□ -1.62
TMEM50B-208	ENST00000474272	INO80B-WBP1	J3KQ70	363 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	EYA4	O95677	639 aa		4.93	□□□□□ -1.62

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