RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 CHMP4BP1P59074 171 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 MECOMQ03112 1051 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 ZNF268Q14587 947 aaPredicted RBP7.86□□□□□ -1.15
GPNMB-209ENST00000474157 DDR2Q16832 855 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 ZNF804AQ7Z570 1209 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 CHD1LQ86WJ1 897 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 RAB11FIP4Q86YS3 637 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 FAM20CQ8IXL6 584 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 ARFGAP2Q8N6H7 521 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 SH3TC2Q8TF17 1288 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 CYB5D2Q8WUJ1 264 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.86□□□□□ -1.15
GPNMB-209ENST00000474157 DPF3Q92784 378 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 KIFAP3Q92845 792 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 CENPTQ96BT3 561 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 IQCDQ96DY2 449 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 CCDC74BQ96LY2 380 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 HAUS7Q99871 368 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 OSBPL1AQ9BXW6 950 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 SLC7A5P2Q9GIP4 190 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 KAT14Q9H8E8 782 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 LRRC42Q9Y546 428 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 SLC12A7Q9Y666 1083 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 PXDNLA1KZ92 1463 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 QSER1Q2KHR3 1735 aa7.86□□□□□ -1.15
GPNMB-209ENST00000474157 LTBP3Q9NS15 1303 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 SLIT3O75094 1523 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 IQANK1A0A1B0GTG1 560 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 TRIM43BA6NCK2 446 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 RGS13O14921 159 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 TSPAN1O60635 241 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 TACC1O75410 805 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 FAM107AO95990 144 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 MMP10P09238 476 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 DPEP1P16444 411 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 KRT4P19013 534 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 CALB2P22676 271 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 MTTPP55157 894 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 GEMIN4P57678 1058 aaKnown RBP7.85□□□□□ -1.15
GPNMB-209ENST00000474157 GNGT1P63211 74 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 ITIH3Q06033 890 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 MYO1EQ12965 1108 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 ITGA7Q13683 1181 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 RASA2Q15283 850 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 SMIM5Q71RC9 77 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 CCDC146Q8IYE0 955 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 BAHD1Q8TBE0 780 aaPredicted RBP7.85□□□□□ -1.15
GPNMB-209ENST00000474157 CDKL2Q92772 493 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 PDP2Q9P2J9 529 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 SAP30BPQ9UHR5 308 aaKnown RBP7.85□□□□□ -1.15
GPNMB-209ENST00000474157 CDC23Q9UJX2 597 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 BTAF1O14981 1849 aa7.85□□□□□ -1.15
GPNMB-209ENST00000474157 ST20-MTHFSA0A0A6YYL1 179 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 FAM95CA0A1B0GW59 222 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 GLTPD2A6NH11 291 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 B2RBV5 119 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 BCAR3O75815 825 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 UBOX5O94941 541 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 CLTAP09496 248 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 ZSCAN22P10073 491 aaPredicted RBP7.84□□□□□ -1.15
GPNMB-209ENST00000474157 PDHBP11177 359 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 GBP1P32455 592 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 CSTF2P33240 577 aaKnown RBP eCLIP7.84□□□□□ -1.15
GPNMB-209ENST00000474157 PEX5P50542 639 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 GPSM2P81274 684 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 KLC1Q07866 573 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 MSLNQ13421 630 aaPredicted RBP7.84□□□□□ -1.15
GPNMB-209ENST00000474157 PKP1Q13835 747 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 COG2Q14746 738 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 NFE2L2Q16236 605 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 RNF187Q5TA31 235 aaPredicted RBP7.84□□□□□ -1.15
GPNMB-209ENST00000474157 TMEM53Q6P2H8 277 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 GIMAP6Q6P9H5 292 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 C6orf15Q6UXA7 325 aaPredicted RBP7.84□□□□□ -1.15
GPNMB-209ENST00000474157 C11orf96Q7Z7L8 435 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 PPFIBP1Q86W92 1011 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 CROCCP3Q8IVE0 287 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 CHCHD4Q8N4Q1 142 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 MFSD2AQ8NA29 543 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 SPERTQ8NA61 448 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 COG1Q8WTW3 980 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 PMM1Q92871 262 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 TUBGCP5Q96RT8 1024 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 SRPK1Q96SB4 655 aaKnown RBP7.84□□□□□ -1.15
GPNMB-209ENST00000474157 MIPEPQ99797 713 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 SSBP4Q9BWG4 385 aaPredicted RBP7.84□□□□□ -1.15
GPNMB-209ENST00000474157 DRC3Q9H069 523 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 IL1RAPL1Q9NZN1 696 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 PIM2Q9P1W9 311 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 STK39Q9UEW8 545 aa7.84□□□□□ -1.15
GPNMB-209ENST00000474157 XPO7Q9UIA9 1087 aaKnown RBP7.84□□□□□ -1.15
GPNMB-209ENST00000474157 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.84□□□□□ -1.15
GPNMB-209ENST00000474157 NSD2O96028 1365 aa7.84□□□□□ -1.16
GPNMB-209ENST00000474157 CNTNAP1P78357 1384 aa7.84□□□□□ -1.16
GPNMB-209ENST00000474157 GAKO14976 1311 aa7.83□□□□□ -1.16
GPNMB-209ENST00000474157 GRIN2DO15399 1336 aa7.83□□□□□ -1.16
GPNMB-209ENST00000474157 DPPA5A6NC42 116 aa7.83□□□□□ -1.16
GPNMB-209ENST00000474157 BOLA2-SMG1P6H3BVE0 249 aa7.83□□□□□ -1.16
GPNMB-209ENST00000474157 MATN2O00339 956 aa7.83□□□□□ -1.16
GPNMB-209ENST00000474157 N4BP3O15049 544 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms