RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 FSHRP23945 695 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 RFC5P40937 340 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 MAGEA9P43362 315 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 QARSP47897 775 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 ATXN1P54253 815 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 PTENP60484 403 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 NTHL1P78549 312 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 FGD1P98174 961 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 AKAP17AQ02040 695 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 CREMQ03060 361 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 PPP2R5CQ13362 524 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 SNW1Q13573 536 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 KRT32Q14532 448 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 UBXN2BQ14CS0 331 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 EMC2Q15006 297 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 NPY5RQ15761 445 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 AMHR2Q16671 573 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 USP41Q3LFD5 358 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 NOTUMQ6P988 496 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 MOXD1Q6UVY6 613 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 Q6ZUG5 572 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 GRASPQ7Z6J2 395 aaPredicted RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 GLYCTKQ8IVS8 523 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 TTC13Q8NBP0 860 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 RNF149Q8NC42 400 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 GSTCDQ8NEC7 633 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 ATRIPQ8WXE1 791 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 FGF13Q92913 245 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 BRF1Q92994 677 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 TATDN2Q93075 761 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 COL26A1Q96A83 441 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 CPB2Q96IY4 423 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 CEP170P1Q96L14 293 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 SLC26A6Q9BXS9 759 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 RNF26Q9BY78 433 aaPredicted RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 BCO2Q9BYV7 579 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 OSBPL6Q9BZF3 934 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 CSRNP2Q9H175 543 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 EPC1Q9H2F5 836 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 NXF3Q9H4D5 531 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 KCNMB3Q9NPA1 279 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 LTB4R2Q9NPC1 389 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 PRMT8Q9NR22 394 aaPredicted RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 SH3GLB2Q9NR46 395 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 ZSCAN32Q9NX65 697 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 MIOSQ9NXC5 875 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 NCDNQ9UBB6 729 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 ADAM28Q9UKQ2 775 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 PCDHA4Q9UN74 947 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 GIT1Q9Y2X7 761 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 MTF2Q9Y483 593 aaPredicted RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 PPME1Q9Y570 386 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 CELSR3Q9NYQ7 3312 aa5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 MTCL1Q9Y4B5 1905 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-204ENST00000474025 SF3B1O75533 1304 aaKnown RBP eCLIP5.72□□□□□ -1.498e-6■■■□□ 17.8
SNRNP40-204ENST00000474025 AKAP13Q12802 2813 aa5.71□□□□□ -1.49
SNRNP40-204ENST00000474025 IGF2RP11717 2491 aa5.71□□□□□ -1.49
SNRNP40-204ENST00000474025 FAM170BA6NMN3 283 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 CCL16O15467 120 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 P4HBP07237 508 aaKnown RBP5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 ADRB1P08588 477 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 POU2F2P09086 479 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 HNRNPA1P09651 372 aaKnown RBP eCLIP5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 CD72P21854 359 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 TARSP26639 723 aaKnown RBP5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 AXLP30530 894 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 HOXA9P31269 272 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 YWHABP31946 246 aaKnown RBP5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 NLRP5P59047 1200 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 PFKPQ01813 784 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 CSTF1Q05048 431 aaKnown RBP5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 MBTD1Q05BQ5 628 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 GRIK3Q13003 919 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 PCBP1Q15365 356 aaKnown RBP eCLIP5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 SLC44A4Q53GD3 710 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 RTP2Q5QGT7 225 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 LIN9Q5TKA1 542 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 PRSS55Q6UWB4 352 aaPredicted RBP5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 RSPO2Q6UXX9 243 aaPredicted RBP5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 MTSS1LQ765P7 747 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 FERMT3Q86UX7 667 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 NPAS3Q8IXF0 933 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 C4orf19Q8IY42 314 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 EXOC8Q8IYI6 725 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 FBXL16Q8N461 479 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 ITFG1Q8TB96 612 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 TCP11Q8WWU5 503 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 PIK3R5Q8WYR1 880 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 RABGGTAQ92696 567 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 CLDN23Q96B33 292 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 KXD1Q9BQD3 176 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 CLSTN3Q9BQT9 956 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 PAAF1Q9BRP4 392 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 LXNQ9BS40 222 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 COLEC11Q9BWP8 271 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 APOL6Q9BWW8 343 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 AGXT2Q9BYV1 514 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 C22orf23Q9BZE7 217 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 NCOA5Q9HCD5 579 aaKnown RBP5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 PARD6AQ9NPB6 346 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms