RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ELANEP08246 267 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 PLCD1P51178 756 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 VAV2P52735 878 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 MGAT5Q09328 741 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 UBE3CQ15386 1083 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 MIDNQ504T8 468 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 TSHZ3Q63HK5 1081 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 SUMO4Q6EEV6 95 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 ESRP1Q6NXG1 681 aaKnown RBP3.13□□□□□ -1.91
CCDC39-203ENST00000473854 ZCCHC8Q6NZY4 707 aaKnown RBP3.13□□□□□ -1.91
CCDC39-203ENST00000473854 UNQ6494/PRO21346Q6UXR6 183 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 ESPNLQ6ZVH7 1005 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 CKAP2LQ8IYA6 745 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 GAB3Q8WWW8 586 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 ARMC5Q96C12 935 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 PHACTR3Q96KR7 559 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 NELL2Q99435 816 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 SAMD15Q9P1V8 674 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 BTBD3Q9Y2F9 522 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 SPO11Q9Y5K1 396 aa3.13□□□□□ -1.91
CCDC39-203ENST00000473854 ZMYM3Q14202 1370 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 PRAMEF4O60810 478 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 ITGA10O75578 1167 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 GPANK1O95872 356 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 CKBP12277 381 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 CERS1P27544 350 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 CRHR1P34998 444 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 ETFDHQ16134 617 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 TSTD2Q5T7W7 516 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 AWAT2Q6E213 333 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 ZDHHC17Q8IUH5 632 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 HMCESQ96FZ2 354 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 ELF4Q99607 663 aaPredicted RBP3.12□□□□□ -1.91
CCDC39-203ENST00000473854 ANLNQ9NQW6 1124 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 USP18Q9UMW8 372 aa3.12□□□□□ -1.91
CCDC39-203ENST00000473854 GCOM1H8Y6P7 765 aaPredicted RBP3.11□□□□□ -1.91
CCDC39-203ENST00000473854 MPPED1O15442 326 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 GLRX3O76003 335 aaKnown RBP3.11□□□□□ -1.91
CCDC39-203ENST00000473854 PFKMP08237 780 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 IGFALSP35858 605 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 GRIA3P42263 894 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 KLF9Q13886 244 aaPredicted RBP3.11□□□□□ -1.91
CCDC39-203ENST00000473854 LRRC32Q14392 662 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 FAM153CQ494X1 144 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 FAM47AQ5JRC9 791 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 RRP12Q5JTH9 1297 aaKnown RBP3.11□□□□□ -1.91
CCDC39-203ENST00000473854 KAZNQ674X7 775 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 KIAA0895LQ68EN5 471 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 MED25Q71SY5 747 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 NEK8Q86SG6 692 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 PASD1Q8IV76 773 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 SAMD14Q8IZD0 417 aaPredicted RBP3.11□□□□□ -1.91
CCDC39-203ENST00000473854 SLC43A3Q8NBI5 491 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 MDM1Q8TC05 714 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 RTF1Q92541 710 aaKnown RBP3.11□□□□□ -1.91
CCDC39-203ENST00000473854 GMLQ99445 158 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 FDXACB1Q9BRP7 624 aaPredicted RBP3.11□□□□□ -1.91
CCDC39-203ENST00000473854 TINF2Q9BSI4 451 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 WNT8AQ9H1J5 351 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 UNKLQ9H9P5 680 aaKnown RBP3.11□□□□□ -1.91
CCDC39-203ENST00000473854 TOMM22Q9NS69 142 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 GPRC5DQ9NZD1 345 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 B4GALT6Q9UBX8 382 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 MTO1Q9Y2Z2 717 aaKnown RBP3.11□□□□□ -1.91
CCDC39-203ENST00000473854 KDM2BQ8NHM5 1336 aa3.11□□□□□ -1.91
CCDC39-203ENST00000473854 TRGV11A0A075B6L2 103 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 MYMKA6NI61 221 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 YY2O15391 372 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 CD1AP06126 327 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 SLC9A1P19634 815 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 FGFR4P22455 802 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 GCSHP23434 173 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 CCKARP32238 428 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 FLT3P36888 993 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 CYP2A13Q16696 494 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 GJC2Q5T442 439 aaPredicted RBP3.1□□□□□ -1.91
CCDC39-203ENST00000473854 FGD2Q7Z6J4 655 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 SSH3Q8TE77 659 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 ZNF480Q8WV37 535 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 SNX33Q8WV41 574 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 ANO3Q9BYT9 981 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 TRIM39Q9HCM9 518 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 LRP12Q9Y561 859 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 AOX1Q06278 1338 aa3.1□□□□□ -1.91
CCDC39-203ENST00000473854 IGKV2D-30A0A075B6S6 120 aa3.09□□□□□ -1.91
CCDC39-203ENST00000473854 ERVV-2B6SEH9 535 aa3.09□□□□□ -1.91
CCDC39-203ENST00000473854 PPEF2O14830 753 aa3.09□□□□□ -1.91
CCDC39-203ENST00000473854 PHF2O75151 1096 aa3.09□□□□□ -1.91
CCDC39-203ENST00000473854 ZSWIM2Q8NEG5 633 aa3.09□□□□□ -1.91
CCDC39-203ENST00000473854 CEP95Q96GE4 821 aa3.09□□□□□ -1.91
CCDC39-203ENST00000473854 MED15Q96RN5 788 aa3.09□□□□□ -1.91
CCDC39-203ENST00000473854 ZSWIM1Q9BR11 485 aa3.09□□□□□ -1.91
CCDC39-203ENST00000473854 CXorf49A8MYA2 514 aaPredicted RBP3.08□□□□□ -1.92
CCDC39-203ENST00000473854 KRT86O43790 486 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 STK10O94804 968 aaKnown RBP3.08□□□□□ -1.92
CCDC39-203ENST00000473854 ASLP04424 464 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 SRGNP10124 158 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 EPHB2P29323 1055 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 MAPK10P53779 464 aa3.08□□□□□ -1.92
CCDC39-203ENST00000473854 MFAP1P55081 439 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms