RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ALKAL1Q6UXT8 129 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 RNF168Q8IYW5 571 aaPredicted RBP20.71■□□□□ 0.91
PTCD3-210ENST00000473829 EFHBQ8N7U6 833 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 MRPL43Q8N983 215 aaKnown RBP20.71■□□□□ 0.91
PTCD3-210ENST00000473829 PPP2R3CQ969Q6 453 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 PPP1R10Q96QC0 940 aaKnown RBP20.71■□□□□ 0.91
PTCD3-210ENST00000473829 MRPL44Q9H9J2 332 aaKnown RBP20.71■□□□□ 0.91
PTCD3-210ENST00000473829 OLFML3Q9NRN5 406 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 KCNH3Q9ULD8 1083 aa20.71■□□□□ 0.91
PTCD3-210ENST00000473829 A0A1B0GVL5 298 aa20.7■□□□□ 0.9
PTCD3-210ENST00000473829 FAM189A1O60320 539 aa20.7■□□□□ 0.9
PTCD3-210ENST00000473829 MYBP10242 640 aa20.7■□□□□ 0.9
PTCD3-210ENST00000473829 TNFSF9P41273 254 aa20.7■□□□□ 0.9
PTCD3-210ENST00000473829 MATR3P43243 847 aaKnown RBP eCLIP20.7■□□□□ 0.9
PTCD3-210ENST00000473829 YARSP54577 528 aaKnown RBP20.7■□□□□ 0.9
PTCD3-210ENST00000473829 COASYQ13057 564 aa20.7■□□□□ 0.9
PTCD3-210ENST00000473829 LEXMQ3ZCV2 418 aa20.7■□□□□ 0.9
PTCD3-210ENST00000473829 HERC4Q5GLZ8 1057 aaPredicted RBP20.7■□□□□ 0.9
PTCD3-210ENST00000473829 ADALQ6DHV7 355 aa20.7■□□□□ 0.9
PTCD3-210ENST00000473829 TAS1R1Q7RTX1 841 aa20.7■□□□□ 0.9
PTCD3-210ENST00000473829 HPS3Q969F9 1004 aa20.7■□□□□ 0.9
PTCD3-210ENST00000473829 ZMAT2Q96NC0 199 aaKnown RBP20.7■□□□□ 0.9
PTCD3-210ENST00000473829 ACAP3Q96P50 834 aa20.7■□□□□ 0.9
PTCD3-210ENST00000473829 MUC3AQ02505 3323 aa20.7■□□□□ 0.9
PTCD3-210ENST00000473829 SMIM28A0A1B0GU29 152 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.69■□□□□ 0.9
PTCD3-210ENST00000473829 NCK2O43639 380 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 ACTN4O43707 911 aaKnown RBP20.69■□□□□ 0.9
PTCD3-210ENST00000473829 KIF4AO95239 1232 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 CXCL14O95715 111 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 CXCL8P10145 99 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 BMP1P13497 986 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 CMA1P23946 247 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 IGFBP6P24592 240 aaPredicted RBP20.69■□□□□ 0.9
PTCD3-210ENST00000473829 NUCB2P80303 420 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 SOX4Q06945 474 aaPredicted RBP20.69■□□□□ 0.9
PTCD3-210ENST00000473829 KCNC3Q14003 757 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 PTPN14Q15678 1187 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 AAK1Q2M2I8 961 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 SLC10A6Q3KNW5 377 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 CNNM4Q6P4Q7 775 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 GRAMD1CQ8IYS0 662 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 GLIS3Q8NEA6 775 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.69■□□□□ 0.9
PTCD3-210ENST00000473829 HASPINQ8TF76 798 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 HERC2P3Q9BVR0 1158 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 COL25A1Q9BXS0 654 aaPredicted RBP20.69■□□□□ 0.9
PTCD3-210ENST00000473829 SCAND2PQ9GZW5 306 aaPredicted RBP20.69■□□□□ 0.9
PTCD3-210ENST00000473829 GOLGA2P5Q9HBQ8 144 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 TOPORSQ9NS56 1045 aaPredicted RBP20.69■□□□□ 0.9
PTCD3-210ENST00000473829 CLEC1BQ9P126 229 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 CNTN3Q9P232 1028 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 SERTAD1Q9UHV2 236 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 BARX2Q9UMQ3 279 aaPredicted RBP20.69■□□□□ 0.9
PTCD3-210ENST00000473829 HPSEQ9Y251 543 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 C5orf42Q9H799 3197 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 ANK1P16157 1881 aa20.69■□□□□ 0.9
PTCD3-210ENST00000473829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.68■□□□□ 0.9
PTCD3-210ENST00000473829 A0A0B4J269 797 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 GCNT3O95395 438 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 ABCD1P33897 745 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 CA8P35219 290 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 ASIC1P78348 528 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 HSP90AA2PQ14568 343 aaPredicted RBP20.68■□□□□ 0.9
PTCD3-210ENST00000473829 CLUL1Q15846 466 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 TPRNQ4KMQ1 711 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 FUT10Q6P4F1 479 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 CCDC65Q8IXS2 484 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 HVCN1Q96D96 273 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 C7orf25Q9BPX7 421 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 COLEC11Q9BWP8 271 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 GPR62Q9BZJ7 368 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 BLZF1Q9H2G9 400 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 MAGEF1Q9HAY2 307 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 ADAM28Q9UKQ2 775 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 IRAK3Q9Y616 596 aa20.68■□□□□ 0.9
PTCD3-210ENST00000473829 VWA8A3KMH1 1905 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 OGTO15294 1046 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 NR1I2O75469 434 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 SOD2P04179 222 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 KCNE1P15382 129 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 AFMP43652 599 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 NDUFV1P49821 464 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 L1TD1Q5T7N2 865 aaKnown RBP20.67■□□□□ 0.9
PTCD3-210ENST00000473829 TMEM130Q8N3G9 435 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 MSLNLQ96KJ4 702 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 B3GALT6Q96L58 329 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 CDCA3Q99618 268 aaPredicted RBP20.67■□□□□ 0.9
PTCD3-210ENST00000473829 LRRC27Q9C0I9 530 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 GOLPH3LQ9H4A5 285 aa20.67■□□□□ 0.9
PTCD3-210ENST00000473829 FAM237AA0A1B0GTK4 181 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 LILRB3O75022 631 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 CLASP2O75122 1294 aaKnown RBP20.66■□□□□ 0.9
PTCD3-210ENST00000473829 CLTAP09496 248 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 SLFN14P0C7P3 912 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 CLCNKBP51801 687 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 NDUFA8P51970 172 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 AMPD3Q01432 767 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 CUL4BQ13620 913 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 ENOX2Q16206 610 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms