RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 MTMR12Q9C0I1 747 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 APOBEC3GQ9HC16 384 aaKnown RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 OSGEPQ9NPF4 335 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 NENFQ9UMX5 172 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 COQ4Q9Y3A0 265 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 SAR1BQ9Y6B6 198 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 BZW2Q9Y6E2 419 aaKnown RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 GRID2IPA4D2P6 1211 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 GPR25O00155 361 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 ATMINO43313 823 aaPredicted RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 AOC2O75106 756 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 CST3P01034 146 aaPredicted RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 MMEP08473 750 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 CHRNB2P17787 502 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 TNFAIP3P21580 790 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 GPC3P51654 580 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 RNASE9P60153 205 aaKnown RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 KIF22Q14807 665 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 DGKDQ16760 1214 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 ZACNQ401N2 412 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 SLFN12LQ6IEE8 588 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 TLK2Q86UE8 772 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 TRIM58Q8NG06 486 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 SLC30A5Q8TAD4 765 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 EPS8L1Q8TE68 723 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 LMBR1Q8WVP7 490 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 NLRP7Q8WX94 980 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 KAT2BQ92831 832 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 MS4A14Q96JA4 679 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 NOX5Q96PH1 765 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 AGPAT1Q99943 283 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 CDHR5Q9HBB8 845 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 GPBP1L1Q9HC44 474 aaPredicted RBP6.72□□□□□ -1.33
CLK1-210ENST00000473565 RNF19AQ9NV58 838 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 GJD2Q9UKL4 321 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 GABRQQ9UN88 632 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 TLL2Q9Y6L7 1015 aa6.72□□□□□ -1.33
CLK1-210ENST00000473565 MYADML2A6NDP7 307 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 ACKR2O00590 384 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 PHACTR2O75167 634 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 H2AFZP0C0S5 128 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 RHOXF2BP0C7M4 288 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 CXCL8P10145 99 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 TFAMQ00059 246 aaKnown RBP6.71□□□□□ -1.33
CLK1-210ENST00000473565 TRIM32Q13049 653 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 BMS1Q14692 1282 aaKnown RBP6.71□□□□□ -1.33
CLK1-210ENST00000473565 C2CD6Q53TS8 623 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 IQSEC1Q6DN90 963 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 ZPBP2Q6X784 338 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 H2AFVQ71UI9 128 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 SRGAP1Q7Z6B7 1085 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 PHLDB2Q86SQ0 1253 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 VPS36Q86VN1 386 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 EFCAB13Q8IY85 973 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 LINC01465Q8N7H1 131 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 SHC3Q92529 594 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 USP6NLQ92738 828 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 RHOXF2Q9BQY4 288 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 TLR10Q9BXR5 811 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 CDT1Q9H211 546 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 FZD8Q9H461 694 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 ZFYVE28Q9HCC9 887 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 KCNG1Q9UIX4 513 aa6.71□□□□□ -1.33
CLK1-210ENST00000473565 GNEQ9Y223 722 aaKnown RBP6.71□□□□□ -1.33
CLK1-210ENST00000473565 EFCAB8A8MWE9 144 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 MEFVO15553 781 aaPredicted RBP6.71□□□□□ -1.34
CLK1-210ENST00000473565 MYCNP04198 464 aaPredicted RBP6.71□□□□□ -1.34
CLK1-210ENST00000473565 MYL3P08590 195 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 MFAP3P55082 362 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 TFDP1Q14186 410 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 AMHR2Q16671 573 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 PAPD7Q5XG87 772 aaKnown RBP6.71□□□□□ -1.34
CLK1-210ENST00000473565 RUFY4Q6ZNE9 571 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 RSRC2Q7L4I2 434 aaKnown RBP6.71□□□□□ -1.34
CLK1-210ENST00000473565 BRSK2Q8IWQ3 736 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 FAM71AQ8IYT1 594 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 KIAA0319LQ8IZA0 1049 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 TRPV1Q8NER1 839 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 ALS2CR12Q96Q35 445 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 CGRRF1Q99675 332 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 JPH2Q9BR39 696 aaPredicted RBP6.71□□□□□ -1.34
CLK1-210ENST00000473565 THAP2Q9H0W7 228 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 CXCL16Q9H2A7 254 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 C1orf112Q9NSG2 853 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 NOCTQ9UK39 431 aaKnown RBP6.71□□□□□ -1.34
CLK1-210ENST00000473565 NUB1Q9Y5A7 615 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 ANK1P16157 1881 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 DCAF8L1A6NGE4 600 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 KIF3CO14782 793 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 OGTO15294 1046 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 GAS2O43903 313 aaKnown RBP6.71□□□□□ -1.34
CLK1-210ENST00000473565 CFHP08603 1231 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 SMIM10L2AP0DMW4 78 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 SMIM10L2BP0DMW5 78 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 ARF4P18085 180 aaPredicted RBP6.71□□□□□ -1.34
CLK1-210ENST00000473565 GUCY2FP51841 1108 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 MYL6P60660 151 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 CLDN10P78369 228 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 MCL1Q07820 350 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 NCOA4Q13772 614 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms