RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 HAUS6Q7Z4H7 955 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 ADHFE1Q8IWW8 467 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 PDILTQ8N807 584 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 SMRP1Q8NCR6 262 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 SPIRE2Q8WWL2 714 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 RPGRIP1Q96KN7 1286 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 PANK2Q9BZ23 570 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 CDT1Q9H211 546 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 DZANK1Q9NVP4 752 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 CLEC1BQ9P126 229 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 CACNG4Q9UBN1 327 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 FBXO2Q9UK22 296 aaPredicted RBP12.62□□□□□ -0.39
CPNE1-222ENST00000473373 VWA8A3KMH1 1905 aa12.62□□□□□ -0.39
CPNE1-222ENST00000473373 ANK1P16157 1881 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 MUC6Q6W4X9 2439 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 TRAK2O60296 914 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 ZSCAN22P10073 491 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-222ENST00000473373 MYBP10242 640 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 MCF2P10911 925 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 IDEP14735 1019 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 ABCD1P33897 745 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 DDIT3P35638 169 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 GRM5P41594 1212 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 DSC1Q08554 894 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 PTPN14Q15678 1187 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 USP41Q3LFD5 358 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 HFE2Q6ZVN8 426 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 CEP120Q8N960 986 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 VN1R2Q8NFZ6 395 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 RIN2Q8WYP3 895 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-222ENST00000473373 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 MSLNLQ96KJ4 702 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 RIPOR3Q96MK2 946 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 BLOC1S4Q9NUP1 217 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 SLC38A7Q9NVC3 462 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 MARCH5Q9NX47 278 aa12.61□□□□□ -0.39
CPNE1-222ENST00000473373 F8W810 466 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 INPPL1O15357 1258 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 TOM1L1O75674 476 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 GLUD1P00367 558 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 F13A1P00488 732 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 MAPTP10636 758 aaKnown RBP12.6□□□□□ -0.39
CPNE1-222ENST00000473373 EPCAMP16422 314 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 NCKAP1LP55160 1127 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 CREMQ03060 361 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 ELAVL2Q12926 359 aaKnown RBP12.6□□□□□ -0.39
CPNE1-222ENST00000473373 CBX2Q14781 532 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-222ENST00000473373 ARSHQ5FYA8 562 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 FAM171A1Q5VUB5 890 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 USP49Q70CQ1 688 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 TMEM161BQ8NDZ6 487 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 NOC3LQ8WTT2 800 aaKnown RBP12.6□□□□□ -0.39
CPNE1-222ENST00000473373 ZBTB45Q96K62 511 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-222ENST00000473373 B3GALT6Q96L58 329 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 KLHL5Q96PQ7 755 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 MRPL44Q9H9J2 332 aaKnown RBP12.6□□□□□ -0.39
CPNE1-222ENST00000473373 DPP7Q9UHL4 492 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 NUB1Q9Y5A7 615 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 IRAK3Q9Y616 596 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 MYO10Q9HD67 2058 aa12.6□□□□□ -0.39
CPNE1-222ENST00000473373 PTGESO14684 152 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 TRAPPC3O43617 180 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 B3GAT3O94766 335 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 CNPP09543 421 aaKnown RBP12.59□□□□□ -0.39
CPNE1-222ENST00000473373 SCP2P22307 547 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 MTHFRP42898 656 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 ME1P48163 572 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 ITIH3Q06033 890 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 PPP2R3AQ06190 1150 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 BECN1Q14457 450 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 SEZ6Q53EL9 994 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 ZPBP2Q6X784 338 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 TAS1R3Q7RTX0 852 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 TAS1R1Q7RTX1 841 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 PALB2Q86YC2 1186 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 C12orf76Q8N812 135 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-222ENST00000473373 GSTCDQ8NEC7 633 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 DDX12PQ92771 950 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 UROC1Q96N76 676 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 PAAF1Q9BRP4 392 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 NTPCRQ9BSD7 190 aaKnown RBP12.59□□□□□ -0.39
CPNE1-222ENST00000473373 PHF7Q9BWX1 381 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-222ENST00000473373 VN1R3Q9BXE9 311 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 LRRC27Q9C0I9 530 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 SFXN1Q9H9B4 322 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 PIDD1Q9HB75 910 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.59□□□□□ -0.39
CPNE1-222ENST00000473373 FAM13BQ9NYF5 915 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 TBC1D7Q9P0N9 293 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 MUTYHQ9UIF7 546 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 CFAP45Q9UL16 551 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 TBX20Q9UMR3 447 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 NR2E1Q9Y466 385 aa12.59□□□□□ -0.39
CPNE1-222ENST00000473373 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-222ENST00000473373 XPOTO43592 962 aaKnown RBP12.58□□□□□ -0.4
CPNE1-222ENST00000473373 PPP6R2O75170 966 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 KIF4AO95239 1232 aa12.58□□□□□ -0.4
CPNE1-222ENST00000473373 GCNT3O95395 438 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms