RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.68□□□□□ -0.7
MCF2L-223ENST00000473345 SNTG2Q9NY99 539 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 STK39Q9UEW8 545 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 PARP2Q9UGN5 583 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 SSX2IPQ9Y2D8 614 aa10.68□□□□□ -0.7
MCF2L-223ENST00000473345 KMT2BQ9UMN6 2715 aaPredicted RBP10.67□□□□□ -0.7
MCF2L-223ENST00000473345 TBX3O15119 743 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 TADA2AO75478 443 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 RECQL4O94761 1208 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 LARGE1O95461 756 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 C1RP00736 705 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 CEBPBP17676 345 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 RFX1P22670 979 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 CCR2P41597 374 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 SOX4Q06945 474 aaPredicted RBP10.67□□□□□ -0.7
MCF2L-223ENST00000473345 TUSC3Q13454 348 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 PSMD5Q16401 504 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 VARS2Q5ST30 1063 aaKnown RBP10.67□□□□□ -0.7
MCF2L-223ENST00000473345 TANGO2Q6ICL3 276 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 SLC27A1Q6PCB7 646 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 NOSTRINQ8IVI9 506 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 TRIM22Q8IYM9 498 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 CLDN23Q96B33 292 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 TCEAL4Q96EI5 215 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 MCRS1Q96EZ8 462 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 HINFPQ9BQA5 517 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 TTPALQ9BTX7 342 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 NFKBIZQ9BYH8 718 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 CCDC113Q9H0I3 377 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 TMEM60Q9H2L4 133 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 FZD8Q9H461 694 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 GOLGA2P5Q9HBQ8 144 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 HEBP1Q9NRV9 189 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 SPATA6Q9NWH7 488 aaPredicted RBP10.67□□□□□ -0.7
MCF2L-223ENST00000473345 TPCN1Q9ULQ1 816 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 PPME1Q9Y570 386 aa10.67□□□□□ -0.7
MCF2L-223ENST00000473345 CCDC194A0A1B0GVG4 234 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 DCDC2BA2VCK2 349 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 USO1O60763 962 aaKnown RBP10.66□□□□□ -0.7
MCF2L-223ENST00000473345 TKTP29401 623 aaKnown RBP10.66□□□□□ -0.7
MCF2L-223ENST00000473345 OR1D2P34982 312 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 BRCC3P46736 316 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 RAB33AQ14088 237 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 GAS6Q14393 721 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 MXD4Q14582 209 aaPredicted RBP10.66□□□□□ -0.7
MCF2L-223ENST00000473345 GLRA4Q5JXX5 417 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 PPM1LQ5SGD2 360 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 AXDND1Q5T1B0 1012 aaPredicted RBP10.66□□□□□ -0.7
MCF2L-223ENST00000473345 CDCA2Q69YH5 1023 aaPredicted RBP10.66□□□□□ -0.7
MCF2L-223ENST00000473345 GALNT17Q6IS24 598 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 TPRG1Q6ZUI0 275 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 ZSWIM3Q96MP5 696 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 MTMR9Q96QG7 549 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 KIFC3Q9BVG8 833 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 PRMT8Q9NR22 394 aaPredicted RBP10.66□□□□□ -0.7
MCF2L-223ENST00000473345 ANKEF1Q9NU02 776 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 C2orf42Q9NWW7 574 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 MTRRQ9UBK8 725 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 POLIQ9UNA4 740 aa10.66□□□□□ -0.7
MCF2L-223ENST00000473345 SF3B1O75533 1304 aaKnown RBP eCLIP10.65□□□□□ -0.7
MCF2L-223ENST00000473345 MIA3Q5JRA6 1907 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 KINO60870 393 aaKnown RBP10.65□□□□□ -0.7
MCF2L-223ENST00000473345 MOSPD3O75425 235 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 MED24O75448 989 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 DGAT1O75907 488 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 SEC24AO95486 1093 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 HNRNPA1P09651 372 aaKnown RBP eCLIP10.65□□□□□ -0.7
MCF2L-223ENST00000473345 GCFC2P16383 781 aaKnown RBP10.65□□□□□ -0.7
MCF2L-223ENST00000473345 FGFR3P22607 806 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 HOXA9P31269 272 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 DMWDQ09019 674 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 ST3GAL1Q11201 340 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 MTAPQ13126 283 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 LPAL2Q16609 132 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 ECM1Q16610 540 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 ZNF528Q3MIS6 628 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 PRSS36Q5K4E3 855 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 NT5DC1Q5TFE4 455 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 ZC3H14Q6PJT7 736 aaKnown RBP10.65□□□□□ -0.7
MCF2L-223ENST00000473345 CENPQQ7L2Z9 268 aaPredicted RBP10.65□□□□□ -0.7
MCF2L-223ENST00000473345 OTUD6AQ7L8S5 288 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 CEP120Q8N960 986 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 DDX27Q96GQ7 796 aaKnown RBP10.65□□□□□ -0.7
MCF2L-223ENST00000473345 PPP1R10Q96QC0 940 aaKnown RBP10.65□□□□□ -0.7
MCF2L-223ENST00000473345 TRIM6Q9C030 488 aaPredicted RBP10.65□□□□□ -0.7
MCF2L-223ENST00000473345 EPC1Q9H2F5 836 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 FBXO4Q9UKT5 387 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 SMG5Q9UPR3 1016 aaKnown RBP10.65□□□□□ -0.7
MCF2L-223ENST00000473345 CDY1Q9Y6F8 540 aa10.65□□□□□ -0.7
MCF2L-223ENST00000473345 ZMYM2Q9UBW7 1377 aa10.65□□□□□ -0.71
MCF2L-223ENST00000473345 STK36Q9NRP7 1315 aa10.64□□□□□ -0.71
MCF2L-223ENST00000473345 LRRIQ4A6NIV6 560 aa10.64□□□□□ -0.71
MCF2L-223ENST00000473345 CPLX1O14810 134 aa10.64□□□□□ -0.71
MCF2L-223ENST00000473345 LAMTOR5O43504 91 aa10.64□□□□□ -0.71
MCF2L-223ENST00000473345 TBC1D4O60343 1298 aa10.64□□□□□ -0.71
MCF2L-223ENST00000473345 DKC1O60832 514 aaKnown RBP eCLIP10.64□□□□□ -0.711e-7■■■■■ 45.3
MCF2L-223ENST00000473345 RHOP08100 348 aa10.64□□□□□ -0.71
MCF2L-223ENST00000473345 PSMA5P28066 241 aa10.64□□□□□ -0.71
MCF2L-223ENST00000473345 CLCNKBP51801 687 aa10.64□□□□□ -0.71
MCF2L-223ENST00000473345 FOSBP53539 338 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms