RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 DSC1Q08554 894 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 STK3Q13188 491 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 EPHA7Q15375 998 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 LIN9Q5TKA1 542 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 FUT10Q6P4F1 479 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 PADI6Q6TGC4 694 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 RUFY3Q7L099 469 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 SKAP1Q86WV1 359 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 TPH2Q8IWU9 490 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 SLFN12Q8IYM2 578 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 DAGLBQ8NCG7 672 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 RUBCNQ92622 972 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 KCNB2Q92953 911 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 ZNF707Q96C28 371 aaPredicted RBP7.68□□□□□ -1.18
CKS1B-205ENST00000473344 RMDN1Q96DB5 314 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 DYDC2Q96IM9 177 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 B3GALT6Q96L58 329 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 BCO2Q9BYV7 579 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 CSRNP2Q9H175 543 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 KCNMB3Q9NPA1 279 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 NPDC1Q9NQX5 325 aaPredicted RBP7.68□□□□□ -1.18
CKS1B-205ENST00000473344 CHST7Q9NS84 486 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 FNIP2Q9P278 1114 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 WRAP73Q9P2S5 460 aaPredicted RBP7.68□□□□□ -1.18
CKS1B-205ENST00000473344 PARP2Q9UGN5 583 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 ADAM28Q9UKQ2 775 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 VAV3Q9UKW4 847 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 POLIQ9UNA4 740 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 CYP46A1Q9Y6A2 500 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 NUMBLQ9Y6R0 609 aa7.68□□□□□ -1.18
CKS1B-205ENST00000473344 SF3B1O75533 1304 aaKnown RBP eCLIP7.68□□□□□ -1.18
CKS1B-205ENST00000473344 DENND4AQ7Z401 1863 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 ANHXE9PGG2 379 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 F8W810 466 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 TBX3O15119 743 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 SP9P0CG40 484 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 RPL17P18621 184 aaKnown RBP7.67□□□□□ -1.18
CKS1B-205ENST00000473344 PTENP60484 403 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 GRIK3Q13003 919 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 HTR4Q13639 388 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 CTTNQ14247 550 aaKnown RBP7.67□□□□□ -1.18
CKS1B-205ENST00000473344 PUM1Q14671 1186 aaKnown RBP eCLIP7.67□□□□□ -1.18
CKS1B-205ENST00000473344 TMEM132AQ24JP5 1023 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 PPM1LQ5SGD2 360 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 SLC27A1Q6PCB7 646 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 PIK3AP1Q6ZUJ8 805 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 MTSS1LQ765P7 747 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 GRASPQ7Z6J2 395 aaPredicted RBP7.67□□□□□ -1.18
CKS1B-205ENST00000473344 CEP57Q86XR8 500 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 GPR65Q8IYL9 337 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 RNF168Q8IYW5 571 aaPredicted RBP7.67□□□□□ -1.18
CKS1B-205ENST00000473344 ST13P5Q8NFI4 369 aaPredicted RBP7.67□□□□□ -1.18
CKS1B-205ENST00000473344 PJA1Q8NG27 643 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 ANP32BQ92688 251 aaKnown RBP7.67□□□□□ -1.18
CKS1B-205ENST00000473344 ZNF274Q96GC6 653 aaPredicted RBP7.67□□□□□ -1.18
CKS1B-205ENST00000473344 GPR62Q9BZJ7 368 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 FOXQ1Q9C009 403 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 NXF3Q9H4D5 531 aaKnown RBP7.67□□□□□ -1.18
CKS1B-205ENST00000473344 SLC2A4RGQ9NR83 387 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 SPATA6Q9NWH7 488 aaPredicted RBP7.67□□□□□ -1.18
CKS1B-205ENST00000473344 MIOSQ9NXC5 875 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 RGL1Q9NZL6 768 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 KCNJ14Q9UNX9 436 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 PCDHB3Q9Y5E6 796 aa7.67□□□□□ -1.18
CKS1B-205ENST00000473344 ZFHX4Q86UP3 3567 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 KANSL1LA0AUZ9 987 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 ZBTB39O15060 712 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 LAMTOR5O43504 91 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 XYLBO75191 536 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 ZMYND10O75800 440 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 DGAT1O75907 488 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 NPTXRO95502 500 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 EFEMP2O95967 443 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 C8AP07357 584 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 HNRNPA1P09651 372 aaKnown RBP eCLIP7.66□□□□□ -1.18
CKS1B-205ENST00000473344 ARF4P18085 180 aaPredicted RBP7.66□□□□□ -1.18
CKS1B-205ENST00000473344 STARD6P59095 220 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 COPS2P61201 443 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 GPC5P78333 572 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 PFKPQ01813 784 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 MBTD1Q05BQ5 628 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 POU5F1BQ06416 359 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 SNW1Q13573 536 aaKnown RBP7.66□□□□□ -1.18
CKS1B-205ENST00000473344 CAPSQ13938 189 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 TOB2Q14106 344 aaPredicted RBP7.66□□□□□ -1.18
CKS1B-205ENST00000473344 UBXN2BQ14CS0 331 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 RTP2Q5QGT7 225 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 TAF3Q5VWG9 929 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 ZNF787Q6DD87 383 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 PDXDC1Q6P996 788 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 LILRA6Q6PI73 481 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 PRSS55Q6UWB4 352 aaPredicted RBP7.66□□□□□ -1.18
CKS1B-205ENST00000473344 PARM1Q6UWI2 310 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 CDR2LQ86X02 465 aaPredicted RBP7.66□□□□□ -1.18
CKS1B-205ENST00000473344 HASPINQ8TF76 798 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 RABGGTAQ92696 567 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 FGF14Q92915 247 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 SECISBP2LQ93073 1101 aaKnown RBP7.66□□□□□ -1.18
CKS1B-205ENST00000473344 BORCS6Q96GS4 357 aa7.66□□□□□ -1.18
CKS1B-205ENST00000473344 AIFM3Q96NN9 605 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms