RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 DHX8Q14562 1220 aaKnown RBP13.88□□□□□ -0.19
C9orf85-204ENST00000473252 HSP90AA2PQ14568 343 aaPredicted RBP13.88□□□□□ -0.19
C9orf85-204ENST00000473252 NAB2Q15742 525 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 USP41Q3LFD5 358 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 ALKAL1Q6UXT8 129 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 USP49Q70CQ1 688 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 SV2BQ7L1I2 683 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 GJD3Q8N144 294 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 VN1R2Q8NFZ6 395 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 LRRC15Q8TF66 581 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 CLIC6Q96NY7 704 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 NECAB3Q96P71 396 aaPredicted RBP13.88□□□□□ -0.19
C9orf85-204ENST00000473252 VN1R3Q9BXE9 311 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 LRRC27Q9C0I9 530 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 RXFP1Q9HBX9 757 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.88□□□□□ -0.19
C9orf85-204ENST00000473252 CHST7Q9NS84 486 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 SLC38A7Q9NVC3 462 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 SEL1LQ9UBV2 794 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 CFAP45Q9UL16 551 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 BARX2Q9UMQ3 279 aaPredicted RBP13.88□□□□□ -0.19
C9orf85-204ENST00000473252 USP20Q9Y2K6 914 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 GDAQ9Y2T3 454 aa13.88□□□□□ -0.19
C9orf85-204ENST00000473252 PRG3Q9Y2Y8 225 aaPredicted RBP13.88□□□□□ -0.19
C9orf85-204ENST00000473252 NPHP3-ACAD11A0A0J9YXS1 232 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 TADA2AO75478 443 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 CA8P35219 290 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 GLUD2P49448 558 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 GTF2BQ00403 316 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 ZP2Q05996 745 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 MCL1Q07820 350 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 NOLC1Q14978 699 aaKnown RBP eCLIP13.87□□□□□ -0.19
C9orf85-204ENST00000473252 SPECC1Q5M775 1068 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 KIAA0319Q5VV43 1072 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 FUT10Q6P4F1 479 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 PDXDC1Q6P996 788 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 ELMSAN1Q6PJG2 1045 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 KCNG4Q8TDN1 519 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 SLC22A17Q8WUG5 538 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 SUSD6Q92537 303 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 HVCN1Q96D96 273 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 DDX27Q96GQ7 796 aaKnown RBP13.87□□□□□ -0.19
C9orf85-204ENST00000473252 KLHL5Q96PQ7 755 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 PPP1R10Q96QC0 940 aaKnown RBP13.87□□□□□ -0.19
C9orf85-204ENST00000473252 TSPAN18Q96SJ8 248 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 S1PR5Q9H228 398 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 CUEDC2Q9H467 287 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 PLEKHA5Q9HAU0 1116 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 FNIP2Q9P278 1114 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 TBX20Q9UMR3 447 aa13.87□□□□□ -0.19
C9orf85-204ENST00000473252 SF3B1O75533 1304 aaKnown RBP eCLIP13.87□□□□□ -0.19
C9orf85-204ENST00000473252 CUTAO60888 179 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 ADH1AP07327 375 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 KCNE1P15382 129 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 GAP43P17677 238 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 KLRC2P26717 231 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 STAT6P42226 847 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 CLCN4P51793 760 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 KIAA1841Q6NSI8 718 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 CES5AQ6NT32 575 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 SYCE2Q6PIF2 218 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 DCLRE1AQ6PJP8 1040 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 HDAC7Q8WUI4 952 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 DDX12PQ92771 950 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 NECTIN4Q96NY8 510 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 FIZ1Q96SL8 496 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 PHF7Q9BWX1 381 aaPredicted RBP13.86□□□□□ -0.19
C9orf85-204ENST00000473252 ADAM7Q9H2U9 754 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 CNTN3Q9P232 1028 aa13.86□□□□□ -0.19
C9orf85-204ENST00000473252 USP15Q9Y4E8 981 aaPredicted RBP13.86□□□□□ -0.19
C9orf85-204ENST00000473252 SMIM28A0A1B0GU29 152 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 K7ENM7 598 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 CNPP09543 421 aaKnown RBP13.85□□□□□ -0.19
C9orf85-204ENST00000473252 LIG4P49917 911 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 POU5F1Q01860 360 aaKnown RBP13.85□□□□□ -0.19
C9orf85-204ENST00000473252 ALCAMQ13740 583 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 CLUL1Q15846 466 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 SLFN12LQ6IEE8 588 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 CYP26C1Q6V0L0 522 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 ZNF720Q7Z2F6 126 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 ZBTB33Q86T24 672 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 MAP4K3Q8IVH8 894 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 AUTS2Q8WXX7 1259 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 BICD1Q96G01 975 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 SNX27Q96L92 541 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 PYM1Q9BRP8 204 aaKnown RBP13.85□□□□□ -0.19
C9orf85-204ENST00000473252 C1QTNF1Q9BXJ1 281 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 RHOBTB2Q9BYZ6 727 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 GPR62Q9BZJ7 368 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 TNMDQ9H2S6 317 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 TFIP11Q9UBB9 837 aaKnown RBP13.85□□□□□ -0.19
C9orf85-204ENST00000473252 PCDHB13Q9Y5F0 798 aa13.85□□□□□ -0.19
C9orf85-204ENST00000473252 CASTOR2A6NHX0 329 aa13.84□□□□□ -0.19
C9orf85-204ENST00000473252 PI4K2BG5E9Z4 385 aa13.84□□□□□ -0.19
C9orf85-204ENST00000473252 HNRNPDLO14979 420 aaKnown RBP13.84□□□□□ -0.19
C9orf85-204ENST00000473252 TRAPPC3O43617 180 aa13.84□□□□□ -0.19
C9orf85-204ENST00000473252 CLTAP09496 248 aa13.84□□□□□ -0.19
C9orf85-204ENST00000473252 ALADP13716 330 aa13.84□□□□□ -0.19
C9orf85-204ENST00000473252 SSTR3P32745 418 aaPredicted RBP13.84□□□□□ -0.19
C9orf85-204ENST00000473252 RPL9P32969 192 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms