RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 B3GAT3O94766 335 aa21.28■■□□□ 1
COMMD1-208ENST00000472729 GLUD1P00367 558 aa21.28■■□□□ 1
COMMD1-208ENST00000472729 MAPTP10636 758 aaKnown RBP21.28■■□□□ 1
COMMD1-208ENST00000472729 NOLC1Q14978 699 aaKnown RBP eCLIP21.28■■□□□ 1
COMMD1-208ENST00000472729 SLC39A14Q15043 492 aa21.28■■□□□ 1
COMMD1-208ENST00000472729 PTPAQ15257 358 aa21.28■■□□□ 1
COMMD1-208ENST00000472729 ARSHQ5FYA8 562 aa21.28■■□□□ 1
COMMD1-208ENST00000472729 PDXDC1Q6P996 788 aa21.28■■□□□ 1
COMMD1-208ENST00000472729 CCDC73Q6ZRK6 1079 aa21.28■■□□□ 1
COMMD1-208ENST00000472729 RNF135Q8IUD6 432 aa21.28■■□□□ 1
COMMD1-208ENST00000472729 HASPINQ8TF76 798 aa21.28■■□□□ 1
COMMD1-208ENST00000472729 PTPRHQ9HD43 1115 aa21.28■■□□□ 1
COMMD1-208ENST00000472729 STK17AQ9UEE5 414 aa21.28■■□□□ 1
COMMD1-208ENST00000472729 FBXO2Q9UK22 296 aaPredicted RBP21.28■■□□□ 1
COMMD1-208ENST00000472729 F8W810 466 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 HNRNPDLO14979 420 aaKnown RBP21.27■■□□□ 1
COMMD1-208ENST00000472729 TEX28O15482 410 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 TRAK2O60296 914 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 CLCN4P51793 760 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 FAM171A1Q5VUB5 890 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 KIAA0319Q5VV43 1072 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 TMC5Q6UXY8 1006 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 SV2BQ7L1I2 683 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 C12orf76Q8N812 135 aaPredicted RBP21.27■■□□□ 1
COMMD1-208ENST00000472729 SLC22A17Q8WUG5 538 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 DDX27Q96GQ7 796 aaKnown RBP21.27■■□□□ 1
COMMD1-208ENST00000472729 TTPALQ9BTX7 342 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 GPR62Q9BZJ7 368 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 CHST7Q9NS84 486 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 BLOC1S4Q9NUP1 217 aa21.27■■□□□ 1
COMMD1-208ENST00000472729 PLXNA4Q9HCM2 1894 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 SMIM28A0A1B0GU29 152 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 LILRB3O75022 631 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 STAT6P42226 847 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 NCKAP1LP55160 1127 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 KYAT1Q16773 422 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 FOXD4L5Q5VV16 416 aaPredicted RBP21.26■□□□□ 0.99
COMMD1-208ENST00000472729 DCLRE1AQ6PJP8 1040 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 TAS1R3Q7RTX0 852 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 GPR65Q8IYL9 337 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 FOXD4L4Q8WXT5 416 aaPredicted RBP21.26■□□□□ 0.99
COMMD1-208ENST00000472729 B3GALT6Q96L58 329 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 CLIC6Q96NY7 704 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 USP28Q96RU2 1077 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 MUC3AQ02505 3323 aa21.26■□□□□ 0.99
COMMD1-208ENST00000472729 KIF4AO95239 1232 aa21.25■□□□□ 0.99
COMMD1-208ENST00000472729 SP100P23497 879 aaPredicted RBP21.25■□□□□ 0.99
COMMD1-208ENST00000472729 PALB2Q86YC2 1186 aa21.25■□□□□ 0.99
COMMD1-208ENST00000472729 CEP120Q8N960 986 aa21.25■□□□□ 0.99
COMMD1-208ENST00000472729 KHSRPQ92945 711 aaKnown RBP eCLIP21.25■□□□□ 0.99
COMMD1-208ENST00000472729 PAAF1Q9BRP4 392 aa21.25■□□□□ 0.99
COMMD1-208ENST00000472729 RXFP1Q9HBX9 757 aa21.25■□□□□ 0.99
COMMD1-208ENST00000472729 MAN1C1Q9NR34 630 aa21.25■□□□□ 0.99
COMMD1-208ENST00000472729 FNIP2Q9P278 1114 aa21.25■□□□□ 0.99
COMMD1-208ENST00000472729 CACNG4Q9UBN1 327 aa21.25■□□□□ 0.99
COMMD1-208ENST00000472729 MUTYHQ9UIF7 546 aa21.25■□□□□ 0.99
COMMD1-208ENST00000472729 TBX20Q9UMR3 447 aa21.25■□□□□ 0.99
COMMD1-208ENST00000472729 LOC730098B7Z3J9 87 aa21.24■□□□□ 0.99
COMMD1-208ENST00000472729 GPR37L1O60883 481 aa21.24■□□□□ 0.99
COMMD1-208ENST00000472729 BRD1O95696 1058 aa21.24■□□□□ 0.99
COMMD1-208ENST00000472729 WEE2P0C1S8 567 aa21.24■□□□□ 0.99
COMMD1-208ENST00000472729 PROZP22891 400 aa21.24■□□□□ 0.99
COMMD1-208ENST00000472729 DYMQ7RTS9 669 aa21.24■□□□□ 0.99
COMMD1-208ENST00000472729 GLYCTKQ8IVS8 523 aa21.24■□□□□ 0.99
COMMD1-208ENST00000472729 RNF168Q8IYW5 571 aaPredicted RBP21.24■□□□□ 0.99
COMMD1-208ENST00000472729 SPRYD3Q8NCJ5 442 aa21.24■□□□□ 0.99
COMMD1-208ENST00000472729 ZBTB45Q96K62 511 aaPredicted RBP21.24■□□□□ 0.99
COMMD1-208ENST00000472729 PPP1R10Q96QC0 940 aaKnown RBP21.24■□□□□ 0.99
COMMD1-208ENST00000472729 PLEKHA4Q9H4M7 779 aa21.24■□□□□ 0.99
COMMD1-208ENST00000472729 NUB1Q9Y5A7 615 aa21.24■□□□□ 0.99
COMMD1-208ENST00000472729 SPTLC2O15270 562 aa21.23■□□□□ 0.99
COMMD1-208ENST00000472729 CLTAP09496 248 aa21.23■□□□□ 0.99
COMMD1-208ENST00000472729 CLCNKBP51801 687 aa21.23■□□□□ 0.99
COMMD1-208ENST00000472729 ZNF131P52739 623 aa21.23■□□□□ 0.99
COMMD1-208ENST00000472729 MCL1Q07820 350 aa21.23■□□□□ 0.99
COMMD1-208ENST00000472729 USP49Q70CQ1 688 aa21.23■□□□□ 0.99
COMMD1-208ENST00000472729 ACSF2Q96CM8 615 aaPredicted RBP21.23■□□□□ 0.99
COMMD1-208ENST00000472729 SNX27Q96L92 541 aa21.23■□□□□ 0.99
COMMD1-208ENST00000472729 PANK2Q9BZ23 570 aa21.23■□□□□ 0.99
COMMD1-208ENST00000472729 LRRC27Q9C0I9 530 aa21.23■□□□□ 0.99
COMMD1-208ENST00000472729 PLEKHA5Q9HAU0 1116 aa21.23■□□□□ 0.99
COMMD1-208ENST00000472729 PIDD1Q9HB75 910 aa21.23■□□□□ 0.99
COMMD1-208ENST00000472729 TFIP11Q9UBB9 837 aaKnown RBP21.23■□□□□ 0.99
COMMD1-208ENST00000472729 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.23■□□□□ 0.99
COMMD1-208ENST00000472729 NCOR1O75376 2440 aa21.22■□□□□ 0.99
COMMD1-208ENST00000472729 FAM86C2PA6NEL3 165 aa21.22■□□□□ 0.99
COMMD1-208ENST00000472729 ZSCAN22P10073 491 aaPredicted RBP21.22■□□□□ 0.99
COMMD1-208ENST00000472729 COL9A1P20849 921 aa21.22■□□□□ 0.99
COMMD1-208ENST00000472729 RPL9P32969 192 aaKnown RBP21.22■□□□□ 0.99
COMMD1-208ENST00000472729 NASPP49321 788 aaPredicted RBP21.22■□□□□ 0.99
COMMD1-208ENST00000472729 PSMD5Q16401 504 aa21.22■□□□□ 0.99
COMMD1-208ENST00000472729 HERC4Q5GLZ8 1057 aaPredicted RBP21.22■□□□□ 0.99
COMMD1-208ENST00000472729 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.22■□□□□ 0.99
COMMD1-208ENST00000472729 C15orf39Q6ZRI6 1047 aa21.22■□□□□ 0.99
COMMD1-208ENST00000472729 CCDC149Q6ZUS6 474 aa21.22■□□□□ 0.99
COMMD1-208ENST00000472729 GPR149Q86SP6 731 aa21.22■□□□□ 0.99
COMMD1-208ENST00000472729 TDRD5Q8NAT2 981 aaKnown RBP21.22■□□□□ 0.99
COMMD1-208ENST00000472729 HDAC7Q8WUI4 952 aa21.22■□□□□ 0.99
COMMD1-208ENST00000472729 DDX12PQ92771 950 aa21.22■□□□□ 0.99
COMMD1-208ENST00000472729 LRFN3Q9BTN0 628 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms