RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 IQCB1Q15051 598 aa11.43□□□□□ -0.58
UBE2F-220ENST00000472479 SPOUT1Q5T280 376 aaKnown RBP11.43□□□□□ -0.58
UBE2F-220ENST00000472479 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.43□□□□□ -0.58
UBE2F-220ENST00000472479 CD302Q8IX05 232 aa11.43□□□□□ -0.58
UBE2F-220ENST00000472479 TMEM192Q8IY95 271 aa11.43□□□□□ -0.58
UBE2F-220ENST00000472479 SMG8Q8ND04 991 aaKnown RBP11.43□□□□□ -0.58
UBE2F-220ENST00000472479 ZSWIM2Q8NEG5 633 aa11.43□□□□□ -0.58
UBE2F-220ENST00000472479 KIF12Q96FN5 646 aa11.43□□□□□ -0.58
UBE2F-220ENST00000472479 MKNK1Q9BUB5 465 aa11.43□□□□□ -0.58
UBE2F-220ENST00000472479 UBE2OQ9C0C9 1292 aaKnown RBP11.43□□□□□ -0.58
UBE2F-220ENST00000472479 RBSNQ9H1K0 784 aa11.43□□□□□ -0.58
UBE2F-220ENST00000472479 RSAD1Q9HA92 442 aa11.43□□□□□ -0.58
UBE2F-220ENST00000472479 PDE11AQ9HCR9 933 aa11.43□□□□□ -0.58
UBE2F-220ENST00000472479 TMEM161AQ9NX61 479 aa11.43□□□□□ -0.58
UBE2F-220ENST00000472479 CPSF3Q9UKF6 684 aaKnown RBP11.43□□□□□ -0.58
UBE2F-220ENST00000472479 GIT1Q9Y2X7 761 aa11.43□□□□□ -0.58
UBE2F-220ENST00000472479 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.43□□□□□ -0.58
UBE2F-220ENST00000472479 GOLGA6L3A6NEY3 463 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 ZNF623O75123 536 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 TNNC2P02585 160 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 EEF1GP26641 437 aaKnown RBP11.42□□□□□ -0.58
UBE2F-220ENST00000472479 CETN1Q12798 172 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 BIRC3Q13489 604 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 ENOX2Q16206 610 aaKnown RBP11.42□□□□□ -0.58
UBE2F-220ENST00000472479 TCP11X2Q5H9J9 407 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 LRRC55Q6ZSA7 311 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 NPAS4Q8IUM7 802 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 HELQQ8TDG4 1101 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 ANKRD36BP1Q96IX9 119 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 PCMTD1Q96MG8 357 aaPredicted RBP11.42□□□□□ -0.58
UBE2F-220ENST00000472479 MED15Q96RN5 788 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 GAD1Q99259 594 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.42□□□□□ -0.583e-6■■■■□ 22.3
UBE2F-220ENST00000472479 TRAIPQ9BWF2 469 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 VPS16Q9H269 839 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 PLEKHA5Q9HAU0 1116 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 RNF19AQ9NV58 838 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 TAB2Q9NYJ8 693 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 SLC4A7Q9Y6M7 1214 aa11.42□□□□□ -0.58
UBE2F-220ENST00000472479 ABLIM1O14639 778 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 MAPK13O15264 365 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 POMCP01189 267 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 TPM3P06753 285 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 THP07101 528 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 ADRB2P07550 413 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 KRT19P08727 400 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 TRIM49P0CI25 452 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 TRIM49CP0CI26 452 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 FGFR1P11362 822 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 MLH1P40692 756 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 MAGEA10P43363 369 aaPredicted RBP11.41□□□□□ -0.58
UBE2F-220ENST00000472479 FAM189BP81408 668 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 MLLT1Q03111 559 aaPredicted RBP11.41□□□□□ -0.58
UBE2F-220ENST00000472479 BFSP1Q12934 665 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 TMEM132DQ14C87 1099 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 NCAPHQ15003 741 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 PSMD6Q15008 389 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 DUOXA2Q1HG44 320 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 TCTN1Q2MV58 587 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 SLC10A6Q3KNW5 377 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 GLRA4Q5JXX5 417 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 TMEM240Q5SV17 173 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 FKBP15Q5T1M5 1219 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 LMBRD2Q68DH5 695 aaPredicted RBP11.41□□□□□ -0.58
UBE2F-220ENST00000472479 CRELD2Q6UXH1 353 aaPredicted RBP11.41□□□□□ -0.58
UBE2F-220ENST00000472479 AGMOQ6ZNB7 445 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 MRPL10Q7Z7H8 261 aaKnown RBP11.41□□□□□ -0.58
UBE2F-220ENST00000472479 GAS2L3Q86XJ1 694 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 BRSK2Q8IWQ3 736 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 BEST2Q8NFU1 509 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 TMC2Q8TDI7 906 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 LINC01599Q8WXQ3 324 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 MFSD14AQ96MC6 490 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 FBXL18Q96ME1 805 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 POP1Q99575 1024 aaKnown RBP11.41□□□□□ -0.58
UBE2F-220ENST00000472479 TUBGCP2Q9BSJ2 902 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 ASB7Q9H672 318 aa11.41□□□□□ -0.58
UBE2F-220ENST00000472479 ELAC1Q9H777 363 aaKnown RBP11.41□□□□□ -0.58
UBE2F-220ENST00000472479 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.4□□□□□ -0.58
UBE2F-220ENST00000472479 TBKBP1A7MCY6 615 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 H0YGN5 161 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 AFPP02771 609 aaKnown RBP11.4□□□□□ -0.58
UBE2F-220ENST00000472479 SCNN1GP51170 649 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 EPHB4P54760 987 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 WDR5P61964 334 aaKnown RBP11.4□□□□□ -0.58
UBE2F-220ENST00000472479 POU5F1Q01860 360 aaKnown RBP11.4□□□□□ -0.58
UBE2F-220ENST00000472479 TRPC3Q13507 836 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 MAN2A1Q16706 1144 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 PAN2Q504Q3 1202 aaKnown RBP11.4□□□□□ -0.58
UBE2F-220ENST00000472479 NOMO2Q5JPE7 1267 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 JADE1Q6IE81 842 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 C16orf59Q7L2K0 433 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 ZC3H3Q8IXZ2 948 aaKnown RBP11.4□□□□□ -0.58
UBE2F-220ENST00000472479 CCDC150Q8NCX0 1101 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 SNX27Q96L92 541 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 RNPC3Q96LT9 517 aaKnown RBP11.4□□□□□ -0.58
UBE2F-220ENST00000472479 YME1L1Q96TA2 773 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 SLC38A7Q9NVC3 462 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 KANSL3Q9P2N6 904 aa11.4□□□□□ -0.58
UBE2F-220ENST00000472479 ARL5CA6NH57 179 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms